Clarias gariepinus (North African catfish): 128535390
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Entry
128535390 CDS
T10780
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
cgar
Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128535390
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128535390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
EGF_2
EGF_PEAR1L
EGF_TEN
EGF_MSP1_1
Plasmod_Pvs28
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
128535390
NCBI-ProteinID:
XP_053365248
LinkDB
All DBs
Position
13:complement(11235532..11355146)
Genome browser
AA seq
1877 aa
AA seq
DB search
MDRVRILLVMSLCISLAHLSDGWRARAGGRERRDAAAVSVHEVFEQLRAQSLNRAPAGPS
PVRSHAVDSDESLRSDTGTAHDPLQEGDTGDVREKTGRIPRQAGRSGDSHRARSISRAST
PERAESKPAHPKRLVGPHVCGGQQCCSGWAVGPGTNRCIKPDCQPPCQNRGSCSRPHTCV
CRSGYQGPRCEEVAPEQVYIRTGTSRVLMPVQPGTDTAHNQSARRRPTERQASESNVKTQ
TPKPPTGRASHSSGTQVRRGSPEVTQHQTGAGQSHVSRTVKRYPSSSAPITSNALPSANA
QHIAYASVQPHASANTVLPAGANLTANVDRIKIVFTPMVCRRICYGGQCYNNCERGDKTT
VFSENQGPPVKTHGFRLFFCQIPCLNGGRCIGQNECWCPSNSTGKFCHLPIPSPSKPLPG
RNTNSNKVQNSSFHSVYTLPLSNQQASLLPSLVNVHVQHPPEAQLQIHQVARVKPGQQAE
TGHSVQQRSQPGNNHINANGNGNGQNSVHSVNQNHGLNHHRPHVRLNGQVGRCFQETVDG
KCGKPLPGLTKQEDCCGSVGAAWGLDKCIECPSKPAYAVIANGLVECPKGYKRLNSTHCQ
DINECLIPGLCKHAECLNTRGSYRCTCKPGYMLDAARSQCVSDKAVSMEKASCYRFISPS
SCSHPMAQKITKQICCCSRVGKAWGSACERCPLPDTDHFKEICPAGHGYTYSRSDVHITL
RELEDEERSEVDSVFSQDPIYPEPPQTLPETSVYQILPPREPVHPENPFYEPSVPSYPQT
PARPQPPRTGHIPLHPPPVYVPEGANTVILEPIHTPPSYPDVVEVTSNSPTYLMPDVDDR
DTAPINVATQVTDIDKCSLTPTICGAGQCVSVQTGYTCYCDPGYTLNALQTTCIDVNECE
NDPCGRKGHCVNTFGSYTCQCLPGYSLIMTQNRKLCQDINECTMSNKCPNGQCINTEGSF
MCECRSGFTRNQRGECEDVDECRSPGVCPNGKCVNTHGSFKCQACGPGFRPDAGRCLDIN
ECQMAAVCTNGRCVNTEGSFTCACNHGYQTTPDNKSCQDVDECLLPDICAHGTCVNFPGS
HRCNCNAGYQSSPDGKACVDINECQMAAVCTKGRCVNTEGSFTCACNHGYQISPDNKSCQ
DVDECLLPDICAHGTCVNFPGSHRCNCNAGYQSSPDGKACVDVNECTESSLCMHGVCANT
VGSFTCTQCEVGYTLSDDRERCEDIDECRTLSTCQNGVCLNSEGSYSCISCPAGFTVSAD
GELCQDIDECQSPDICLLGACMNSEGSYSCTTCESGYRVSSDRRTCEDIDECEDMAACLN
GRCTNTAGSYHCGCAPGFELLNSVCKDINECDDDMICSKNGFCENSIGSYFCHCDQGYVS
IPEGQGCVDADECQLSSELCGEAHCENVEGSFLCLCPTDDEEFDPITTQCKPRHMILPDP
TDERRKDCYYNLNDANFCENVLSSNVTKQECCCTVGAGWGDNCNIHPCPQKGHVEYAELC
PHGPGILPSITSIQGVSHHMTRDADECEMFGPEICKNGYCANVYASYNCYCHSGYYYDNV
RMECVDDDECKEENQCENGECVNTPGSFNCFCPPPMVLDETQRRCISANNTEGPGSYEDY
IHTDICWQKLKPDTTCINPMHGMSTTYTECCCLYGVAWGSQCAFCPERSSEDFALLCNLN
NRGSDSVREHPGFEYGPGPGPDTAPEGHNRQPFWDYPVLERETFYGPENFLTEPTFIDHS
DEYSARDGGRVPVPRPREHQPPFRVLTDRGHSAGFEGLQAEECGVLNGCENGRCVRVREG
YTCDCFDGYELNLGKMACIDINECEDISDKVELCKNGVCTNTEGSYKCTCLPGFLASSKP
HECIPEDQDSVAHTVAN
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcggattttgctcgtgatgtcgctgtgcatctcgctcgcgcacttgagt
gacggctggagggctcgcgcaggtggccgcgagcggagagacgcagccgccgtttcagtg
cacgaggtgttcgagcagctgcgagcgcagagcctaaaccgagctcctgcaggtccgagt
cccgtcagatcccatgcagtcgactcggatgaaagtctgcgatcagacaccggaaccgcg
cacgatccgttacaggagggagacaccggagacgtccgggagaaaaccggtagaatcccg
agacaagctggcaggagcggcgactctcacagagcgcggagcatcagcagagccagcaca
cctgagcgcgcggaaagcaaacctgctcatccaaagcgcctagtcgggccacatgtgtgt
gggggtcagcagtgctgttcaggatgggctgttggaccaggaacaaaccgctgcatcaaa
ccggactgccagcccccgtgtcaaaaccgtggctcatgcagtcgcccacacacctgtgtg
tgccgctcgggttatcagggaccacgctgtgaagaggtagcgcctgagcaggtttacatc
cgcactggcacgtccagagtactgatgccagtccagcctggaacggacaccgcacataat
cagtctgcccgcagaagacccactgagagacaagcgagtgaaagcaatgtcaaaacccaa
acaccgaagccgccaactggcagagcgtcccattcgtctgggacccaggttagacgcggg
tctcccgaggtcacgcagcatcagactggtgcaggacagtcgcatgtctccaggactgtc
aagcgttatccttcatcttcagcaccaataacatcaaacgctctgcccagtgcaaatgct
cagcatatcgcctacgctagtgtccagccgcatgcctccgccaacacagtgcttccagca
ggagcgaacctcacagccaatgtggaccgaatcaagatcgtctttacacccatggtgtgt
aggaggatttgctatggggggcaatgctacaataactgcgagcgtggagataagaccacg
gtgttcagcgagaaccagggcccgccagtcaagacccacggctttagactctttttctgt
cagattccgtgcttgaacggtggacggtgtatcggacaaaacgaatgctggtgtccatcg
aactccacaggaaagttctgtcaccttcctattccgagtcccagcaaacccttacctggt
cgaaataccaatagcaacaaagtacagaacagctcatttcactccgtttacaccctgccc
ctttccaaccagcaagcgtcccttttaccctcgctggtgaatgtgcatgtccagcatcca
ccagaagctcagcttcagatccatcaggttgcacgggtcaaaccgggccaacaagctgaa
acaggacactcagtacaacagcgctctcagcctggcaataatcatatcaatgccaatggg
aatggcaatggacagaacagcgtgcacagcgtgaatcagaaccatgggctgaaccaccac
agaccacatgttaggctaaatggacaagtgggaaggtgtttccaggaaacagttgatgga
aagtgtgggaagcctctgccaggtcttaccaagcaggaagactgctgtggcagtgtggga
gctgcatggggtctggacaaatgcatcgagtgtcccagcaaaccggcttatgcagtgatt
gcaaacggcctagtggaatgtcctaaaggctataaaagactgaattcgactcattgtcaa
gatatcaacgagtgtctgattcccggtttgtgtaaacatgctgagtgtctgaacactagg
ggcagctacaggtgcacgtgtaaacctggatacatgctggacgctgcacgcagtcagtgc
gtctcggataaagccgtgtctatggagaaagcctcatgctaccgcttcatttctccgagt
tcttgtagccatccaatggctcagaaaatcaccaagcaaatctgctgttgcagccgcgtg
ggaaaggcctggggctcggcgtgtgagaggtgcccgttacccgacacagatcactttaag
gagatttgtccagcaggccacggctatacctactctcgctcggatgtccatatcacactt
cgcgagttggaagatgaggagcgctcagaagtcgactctgtcttttctcaggaccccata
tatccagagcctcctcagaccctgccggagacatctgtttaccaaatactaccaccccga
gaacccgttcaccccgagaacccgttttatgagccctcagtgccgtcttatcctcagaca
cctgctaggcctcagccacccaggactggtcacatccctcttcatcctcctccagtctac
gtaccggagggtgctaacaccgtaattttggaaccaatccatacaccgccctcataccca
gatgtggtggaggtcacctctaactctcctacatatctgatgcctgacgtggacgatcgt
gacacggcaccgatcaacgttgccactcaggttacagacattgacaagtgttcgctgact
ccaacaatctgtggtgcaggccagtgtgtgtcagtgcagactggctatacctgctattgt
gacccaggctacaccctcaatgctctgcagaccacctgcattgatgtaaatgaatgcgag
aatgacccatgtggaagaaaaggccactgtgtgaacacttttggctcctacacctgccag
tgcctcccgggttacagcctgatcatgacacaaaacagaaaattgtgtcaagacatcaat
gagtgcaccatgtctaacaaatgtcccaatggccagtgtatcaacactgaggggtccttt
atgtgtgaatgcagaagtggtttcaccaggaaccagagaggagagtgtgaagatgtggat
gagtgcaggagccccggtgtctgccccaatggtaaatgtgtgaacacacacggctcgttc
aagtgccaagcatgtggccctggattcaggcctgacgctgggagatgtctggacattaat
gagtgtcagatggcagctgtctgtacaaatggtcggtgtgtgaacacagagggctccttt
acttgtgcatgtaaccatggataccaaacaactcctgacaataaaagctgccaagatgtg
gacgagtgtctgctcccggacatctgtgctcatggcacatgtgttaattttccgggctca
cacaggtgcaactgtaacgcaggttaccaaagcagccctgatggcaaagcttgtgtggac
attaatgagtgtcagatggcagctgtctgtacaaaaggtcgatgtgtgaacacagagggt
tcctttacttgtgcatgtaaccatggataccaaataagtcctgacaataaaagctgccaa
gatgtggacgagtgtctgctcccggacatctgtgctcatggcacatgtgttaattttccg
ggctcacacaggtgcaactgtaacgcaggttaccaaagcagccctgatggcaaagcttgt
gtggatgtcaatgaatgtacggagtctagcctgtgtatgcatggagtgtgtgctaacact
gttggctcgtttacctgtacccagtgtgaggttggatacactctttctgatgacagagag
aggtgtgaggatatcgacgagtgtcgcaccttgtctacgtgtcagaatggtgtctgtctg
aactcagagggctcgtactcctgcataagttgccccgcaggtttcactgtctcagcagat
ggagagctatgtcaagatattgatgaatgccagtctcctgacatttgtctactgggtgct
tgtatgaattcagagggttcttattcctgcacaacatgcgaatcagggtacagggtctct
tctgaccggcgcacttgtgaagatattgatgaatgtgaggacatggcagcctgtctgaat
ggacgctgtacgaacacagctgggtcctaccactgtggctgcgctccaggctttgagcta
ctaaactctgtctgcaaagacatcaatgaatgtgacgacgacatgatctgtagcaagaac
ggcttctgtgagaactcgatcggctcctatttttgtcattgtgaccaaggatacgtcagt
atacccgagggccaaggttgcgttgatgcagatgaatgtcaactgagtagtgagttgtgt
ggtgaggctcattgtgagaacgtggagggaagcttcctgtgcctctgccccactgatgat
gaggaattcgaccccattacaacacagtgcaaaccccgccacatgatcttaccagaccct
acagacgaacggaggaaggattgctactacaacctaaacgatgccaacttttgtgaaaat
gtgctctctagtaacgtcaccaagcaggaatgctgctgcactgtgggagcaggctgggga
gacaactgcaacatccacccgtgcccacagaaaggacatgtggagtatgccgagttgtgt
cctcatggtcctggaattctgcccagcatcacttcaatccaaggcgtcagtcaccacatg
accagagatgcagatgagtgtgagatgtttggtccagaaatttgtaaaaatggttattgc
gcgaatgtctacgcctcgtataactgctactgtcacagtggctattactatgacaatgtc
cgtatggagtgtgttgatgatgatgaatgtaaggaggaaaatcagtgtgaaaatggagag
tgtgtgaatactcccggctcctttaactgcttctgcccccctccaatggtgctggatgaa
acacagcgtcgctgcatctctgccaacaacacagagggtcctggcagttacgaggattac
attcacacagacatctgctggcagaaacttaaacctgataccacgtgtataaatcccatg
catggtatgtcgactacctacactgagtgttgctgtctctatggtgttgcctggggatcg
cagtgtgccttctgccctgaaagatcatctgaggactttgctttattgtgtaacctgaac
aacagaggctctgacagcgtacgggagcacccaggctttgaatacggacctggacctgga
cctgacaccgcacctgagggacacaatcgtcaaccgttctgggactatcccgtgttagaa
cgtgagacattttatggacctgaaaactttttgaccgagcctacctttattgatcactca
gatgagtacagcgctagagacggaggacgtgtacccgtgcccagaccaagagagcaccag
ccaccctttcgagtgctgaccgacaggggtcatagtgcaggatttgagggtctgcaagca
gaagaatgcggcgtcttgaatggctgtgaaaatggcagatgtgtccgtgtgagagagggc
tacacgtgtgattgcttcgatggctatgagctaaacttaggcaagatggcatgtattgat
ataaacgagtgtgaggatatcagtgacaaagtggagctgtgcaagaacggagtgtgtacc
aacacagagggctcatacaaatgcacctgcttgccaggctttttggcttcttctaagccc
cacgagtgtatcccagaagatcaagattctgttgcccacactgtggcaaactga
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