Clarias gariepinus (North African catfish): 128535473
Help
Entry
128535473 CDS
T10780
Symbol
sptb
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
cgar
Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128535473 (sptb)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128535473 (sptb)
Intermediate filaments
Intermediate filament-binding proteins
128535473 (sptb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
FAM133
Motif
Other DBs
NCBI-GeneID:
128535473
NCBI-ProteinID:
XP_053365355
LinkDB
All DBs
Position
13:complement(19548393..19575634)
Genome browser
AA seq
2355 aa
AA seq
DB search
MTSTTDYDHVDITQQYSRINTRFELSDEELDNDNSTARVFERSRIKALADEREAVQKKTF
TKWVNSILARVSCRISDLYLDLRDGRMLIRLLEVLSGERLPRPTKGRMRIHCLENVDKAL
QFLREKRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEVGRVDKTGKQETRSA
KDALLLWCQMKTTGYPNVNITNFTTSWKDGLAFNALIHKHRPDLIEYGSLQRSNPTHNLH
QAFNVAEKNLGITKLLDPEDVYTENPDEKSIITYVVAFYHYFSKMKALAVEGKRIGKVLD
HASETEEMIKMYETLSSDLLKWIEQTIIILNNRKLANSLNGVQQQLQAFNSYRTIEKPPK
FQEKGNLEVLLFTIQSRMRANNQKVYTPKEGALVADINRAWEQLERAEHERERVLRDELI
RQEKLEQMARRFDRKAAMRETWLQENQKLVAQDNFGYDLPAVEAAKKKHDAIETDIASYE
ERVHALVALSKELEAERYHDAKRIDARKDNILRLWDYLQELLSARRGRLEKNLTLQRIFQ
EMLYIITWMDEMKPRLESTDFGKHLLEVEDLLQKHALIEADIAVQAERVSSANAAALKFA
NGDSYKPCDPQVIRDRVQHLDLCYQEVCALSARRKARLEQSRRFWNFFWEIAELESWIRE
KEHIFSSLDYGKDLTSVLVLQSKHSAFEDELGARGDHMKDVMAEGENMVKAKHFGAPKVQ
QRMDEVQRQWQQLEDLAAFRKQNLQDTQRFFQFQGDADDLKAWLLDAIQQMSSEDIGHEE
YTTQRMLKKHHALRDEAVKNGATIDALTKQANSLPEELKSTPDIQRRLKDIRDLYMELLS
LSDLRQKKLEDTLALYTIFSETDACELWMGQKETWLVGLETPENLEDLEVVQNRLSILAQ
EMDNMQTRVDNINKTAKQLEDSRHPRFKEVKECQTRLNKRWEDFKNMVGFKKQKVDSALS
LHNYGLECDETETWIKEKTRVIESTQDLGNDLAAVMIIQRKLYGIERDMAAIQNKLDFLH
GEAQQLVKDHPEHAADILDRQADLNKAWEILKQTLKDRVDSLGEVSKLQNFLQKLDDFQS
WLYKTQKAVASEDMPMTMPEAEGLLSLHDALKDDVDRHEEDFHSIRDTGATVTRDQEEDA
QYLELDQRLKDLDKGWDELQKMWDSRKNLLDQGMGFQQFSRDAKQAETILNKQEYVLSHL
EQPETLDGAEKALKKHEDFVTTMEANENKILSTLEGGQRLIDSGNLYAPKVKDKMDSIQD
RYKKNQDKAKEVSEKLRDNKALQHFLQNTQDLTLWINEKMLTAQDSSYDEARNLHTKWQK
HQAFMAELASNKDWLNKIDEEGNELMTSKPEFEPIVNDRLTKLHELWNILEHTIQEKARL
LFDAHRSELFQQSLANFKKWLADLRQQLHGDVDEEVKDLTSAKILLKKHQITQNQVQVQA
REPEELQETLQQHTQLTEEQPELEAELMAVQSDFQQLLTPLEQRKGKLEAAKAVYQFYRD
VEDEILWLEERLPMAKSQDHGNNLQTVQLLLKKNQTLQKEIDGHQPRVDELLQRGQGMME
AEERSPKAEDIPEKMERLEEVWAELQDEMTKRRARLNASNDAQQYYNDADEAEAWIGEQE
LYMIADDEAKDEQSAMTLLKRHMILKQVVDEYADSIQDLAERAQKMFAEDHPQGEDIIRR
QGQVDKQYAGLKELAEDRMTKLDHTYDHFLLCREVEDLEHWIAERDVVASSQEMGQDLDH
VTMLRDKFREFARKTGTEGQERVDTVNQIVDKLIEGGHSESSTMAEWKDSINESWADLLE
LIDTRTQLLSSFYDLYKYFCDGKELVVQIKEKQNELPEDLGEDFSKAESFHRVHAAFERD
ISSLGKQVQEFQDTATRLHVQYVGVQADDIKVTEKEVIDAWKGLLSACAGRRKQLEETAN
KFRFFTMIRDLMAWMESIIQQIETQEKPRDVSSVELLMKYHQGIRAEIDARGPKFNDCVE
LAGTLLAHKHKDSDEIKEKLLQLVQKRKEMLNKWDDRWDWLRLLLEVCQFARDASVAEAW
LIAKEPYVVSKDWGETVDEVEKLLRRHEAFEKSTATWEERFSALERLTTLELLEIRKQQQ
ELLKYRQEAEKDSRVEDTGFADESSRLDTIEEQSLSGMVAADPSSSHGDITAGDSAVPVV
SDIQESVSMELDPSTSTQATKEAEHAATFPFTSSQSVPVLLEGTLARKHEMEGPNKKATN
RSWNSIYFVLKPGQLSAYKDAKGFSHNLTYHGETPLSLHNAVCEALSSYKKKKQVFKLRL
GDGSEYLFQCKDEEELNIWIKGIEKAAEYVTEEPVAEPSEPRAQSLPLPTSSSAPEVSSV
KKEKEKRFSLFAKKK
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccacggactatgaccatgttgatatcacacagcagtacagccgcatcaac
acgcgcttcgagctgtctgatgaggagctggacaatgataacagcacagctcgggtcttc
gagcgttcacgcatcaaagctctcgcagatgagagagaagctgtgcaaaagaagaccttc
acaaaatgggtaaactccatcctggctcgagtcagctgccgtatctcagacctctatcta
gacctgcgggatgggaggatgctcatcagattacttgaggttctctcaggggaaagactg
ccgaggcccactaaaggtcgaatgaggattcactgtctagagaatgtagacaaggccctg
cagtttctaagggagaagagggttcatttggagaacatggggtcacatgatattgtggac
ggaaaccaccgtcttatcctgggacttatttggacaatcattcttcgcttccagattcaa
gacattgtagttgaggtaggccgggtagacaagacgggtaagcaggagacgcgctctgct
aaagacgccttgctgctttggtgtcaaatgaagacaactgggtatccaaatgttaatatc
accaacttcaccacaagctggaaggatggcttagctttcaatgcccttatccacaaacac
aggccagatctgattgaatatggctcccttcagaggtccaatccaactcataatcttcac
caagctttcaatgtggctgagaaaaaccttggaatcaccaagctactggacccagaagat
gtatataccgagaacccagatgagaagtccatcatcacttatgttgttgctttctatcac
tacttttccaagatgaaagctctggcagttgaaggcaagcgaattgggaaggtgctagac
catgccagtgagacagaggagatgattaagatgtatgagacactttcctcagacctgtta
aaatggattgaacagaccatcattatcttgaacaaccgcaaacttgcgaactctctgaat
ggagtccagcaacaattacaagccttcaactcataccgtactatagagaaacctccaaaa
tttcaggagaagggaaaccttgaggtactgctcttcacaatccaaagtaggatgagggcc
aacaatcagaaggtttacacccctaaagagggcgcattggtggcagacatcaacagagca
tgggaacaattggagcgggctgaacacgagcgagagagggtgcttagggatgagctcatc
aggcaggaaaagcttgaacaaatggcgcgtcgcttcgacagaaaggctgccatgagagag
acctggctgcaggagaaccaaaaactggtagcacaggataattttggatacgatctgcca
gcagtagaggcagcaaagaaaaagcacgatgccattgagacagacattgcttcatatgaa
gagcgtgtacatgccctggtggccttgtctaaagagctggaggcagaaaggtaccatgat
gctaaacggattgatgcaaggaaagataatatcctcaggctctgggactacctccaggag
cttctgagtgctcgcagggggcgtctggagaaaaatctcaccttgcaaagaatcttccaa
gaaatgctgtacatcattacctggatggatgagatgaagcctcgtctggagtcaactgat
tttgggaagcacttgttggaggtggaggatcttctgcaaaagcatgcgctaattgaagca
gatattgctgtgcaagcagagagagtgagctctgctaatgcagctgctctcaaattcgca
aatggagacagctacaaaccatgtgacccccaagtgattcgagacagggtacaacactta
gacctatgctatcaggaggtgtgtgcactctcagctcgacgcaaggcccgtttggagcag
tctcgcagattctggaactttttctgggagatagcagaactagagagctggatccgtgaa
aaggaacatatcttttcctctctcgactatggcaaggacctgaccagtgtgctggtgctg
cagagtaaacacagtgcttttgaagatgagctaggtgctcggggtgatcatatgaaggat
gtgatggccgaaggtgagaacatggtaaaagccaagcattttggtgctcctaaagtgcaa
caacgcatggatgaagtacaaaggcagtggcagcagctggaggatctcgctgccttccgc
aaacagaacctccaggacacccaacgtttctttcagttccagggtgacgctgatgacctt
aaggcctggttgttggatgccatccagcaaatgagcagtgaggatatcgggcatgaggag
tacactacacagagaatgctcaagaaacatcatgccctaagggatgaggcagttaagaat
ggagccactattgatgctttgaccaaacaggccaattcactgccagaggagcttaaaagc
acaccagacatccaacgacgtctgaaggacattagggatctgtacatggagcttttgtct
ctctcagacctgcggcaaaagaagctagaggacactttggccctgtacaccattttcagt
gagacagatgcctgtgagctttggatgggtcagaaagagacatggctggtcgggttagaa
acaccagagaatctggaagatttggaggtcgttcaaaataggttaagcattcttgcccag
gaaatggacaacatgcagacacgggtggacaatataaacaaaaccgccaagcaactagag
gacagcaggcacccacgattcaaagaagtgaaggaatgtcagactcggctcaataagagg
tgggaagattttaagaatatggtaggatttaagaagcaaaaggtcgattcagcactcagt
cttcacaactatgggcttgagtgtgatgaaactgagacatggatcaaggaaaagacacga
gtcattgagtctacgcaggaccttggaaatgacctggctgctgtcatgattattcagagg
aaactttatggcattgaaagagacatggctgcgattcagaataagctggacttcctacat
ggtgaggcccaacaacttgttaaagaccatcctgagcatgccgccgacatcctggaccga
caagccgacctaaacaaagcttgggagatattgaagcaaacgctaaaggatagagtagac
tctcttggtgaggtgagcaagttgcaaaacttcttgcagaaactagatgactttcagtcc
tggctttacaaaacacagaaagctgttgcatctgaggatatgcctatgaccatgccagag
gcagagggactcttaagtcttcatgatgctcttaaagatgatgtggatagacatgaggag
gactttcacagcattagagacactggagcaaccgtcactcgtgaccaagaggaagatgcc
caatacctagagctggatcagaggctgaaggacctagataagggatgggatgagctgcaa
aaaatgtgggacagtcgaaagaacctattagaccaaggcatgggtttccaacagttttca
agagatgcaaagcaagctgaaaccatcctgaacaaacaggagtacgttctgtctcacctg
gaacagcctgagacacttgatggggcagagaaggctttgaagaagcatgaggacttcgtc
accactatggaggctaatgagaacaaaatattaagtacactagaaggaggtcaaagactg
atagacagtggaaacctttatgccccaaaagtaaaggacaaaatggattcaatccaagac
agatataagaagaaccaagacaaagccaaggaggtatctgagaaactccgagataacaaa
gccctgcaacactttcttcaaaacacccaggatcttactctgtggataaatgagaagatg
ctgaccgctcaggacagctcatatgatgaggctcgcaacctccacaccaaatggcagaaa
caccaggcctttatggcagaactggcttcaaataaggattggctcaacaaaattgacgag
gaaggcaatgagttgatgacctccaaaccggagtttgaacccattgtgaatgatcgactg
acgaagcttcacgaactgtggaacatcctggagcacaccatacaggaaaaggcccggctt
ttgtttgatgcacatcgctccgaactgtttcagcagagcttggctaatttcaaaaaatgg
ttagctgatctgcggcagcagctccatggtgatgttgatgaggaggttaaagatcttact
agtgccaaaattcttctcaagaagcatcagataacacagaatcaagtgcaagtccaagca
cgggagcccgaagagctgcaggagactttgcagcagcatactcagctaactgaagagcaa
cctgagctggaagctgagctcatggctgtccagagtgactttcagcaactccttacccct
ctggagcaacgcaaaggaaaacttgaggcggctaaagccgtgtaccagttctacagggat
gtggaagatgagatactctggcttgaagagaggttgcctatggcaaagtcacaggatcat
gggaacaatctacagacagttcagcttctcctgaaaaagaatcagactctccagaaggag
atcgatggtcaccagccacgtgtggatgagttgttgcagcgtggtcaaggtatgatggaa
gctgaagaaagaagcccaaaggcagaggatatccctgagaaaatggagaggttggaggag
gtgtgggcagagctgcaagatgagatgacaaaaagacgagctcgactcaatgcctctaat
gatgcccagcagtactacaacgatgcagatgaagcagaagcatggattggtgaacaggaa
ctctatatgattgccgacgatgaggcgaaggatgagcagagtgcaatgacattactaaag
aggcacatgattctgaagcaggttgttgatgagtatgcagattctatccaggatcttgct
gaacgtgctcagaagatgtttgctgaagaccaccctcaaggggaggacatcattcggaga
cagggtcaggtggacaaacagtatgcagggctgaaggagctagctgaggatcgcatgacg
aagcttgatcacacttacgatcacttcctcttatgccgggaggtggaagatctggagcac
tggattgctgagcgtgatgtggtggcttcttcacaggagatgggacaggacctggaccat
gttacgatgctgagggacaaattcagggagtttgccaggaagacggggactgagggacag
gagagggtggacactgtgaatcaaatcgttgataagctgattgaaggtggtcatagtgaa
tcatctacaatggctgaatggaaggacagtataaacgagagttgggcagatctcttggag
ctcattgacacccgcacacaactcctcagttctttttatgatctgtataagtacttttgt
gatggtaaggagttggtggtccagatcaaggagaaacaaaatgagcttccggaagatttg
ggagaggatttcagcaaggcagagtctttccatcgcgtacatgctgcatttgaaagagat
attagctctcttggaaagcaggtacaggagtttcaggacactgcaactcgtctgcatgtt
cagtatgttggagtccaggcagatgacattaaggtaacagaaaaagaagtaatagatgcc
tggaagggtctcctgtctgcctgtgccggcaggaggaaacagctggaggagacagcaaac
aagttccgctttttcaccatgatcagggacctaatggcctggatggaaagcatcatccag
caaatagaaactcaagagaaaccaagagacgtgtcgtcagtggaattgctaatgaagtat
caccaagggatccgtgcagagatcgatgctcgtggaccaaagtttaatgactgtgtggag
ttagcggggactcttctagcacacaagcataaggactcagatgaaatcaaagagaagttg
ctgcagctagttcagaagagaaaggaaatgttgaataaatgggatgacagatgggactgg
cttagattgttgttagaggtgtgccagttcgcccgggatgcatctgtagccgaagcctgg
ctgatagctaaggagccatatgtggtcagtaaggactggggtgagactgtggatgaggta
gagaagctgctcaggaggcatgaggcctttgagaaatccactgccacctgggaggagaga
ttctctgcgctggaacggcttacaacacttgagctgcttgaaatcaggaagcagcagcag
gaattgctaaaatacagacaggaagcggaaaaggacagcagggttgaagacacaggcttc
gctgacgagtcctcacgtttggacacaatcgaggagcaatctttatctggcatggtagca
gcagatcccagctcaagccatggagatatcactgcgggcgattcagcggtgcccgtcgtt
tcagatattcaggagagtgtctctatggaactggacccctcaacatctactcaggctacc
aaagaggcagagcacgctgccacttttccctttacatcgtcacagtccgtgccagtcctg
ctggagggaacccttgcgcgtaaacatgagatggagggaccgaataaaaaagcaaccaac
aggtcctggaacagcatctactttgttttaaaacctggccagctttcggcctacaaggat
gcaaagggtttcagccataatcttacatatcatggagagaccccactttcactccacaat
gctgtttgcgaggctctgtccagttacaagaaaaagaagcaggtgtttaaactacggctt
ggagatggaagtgaatacctgtttcagtgtaaagatgaggaagaactaaacatctggatt
aagggcatagagaaagcagcagagtatgtgacagaggagcctgtagcggagccttcagaa
cctcgagcccagagcttgccccttcctacatcttcaagtgctcctgaagtttcctctgtc
aaaaaggaaaaggaaaagaggtttagtttattcgccaaaaagaagtga
DBGET
integrated database retrieval system
