Clarias gariepinus (North African catfish): 128535481
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Entry
128535481 CDS
T10780
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04519
Cadherin signaling
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128535481 (pals1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128535481 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128535481 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
PDZ domain-containing proteins
MAGUK family proteins
128535481 (pals1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
Motif
Other DBs
NCBI-GeneID:
128535481
NCBI-ProteinID:
XP_053365375
LinkDB
All DBs
Position
13
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AA seq
701 aa
AA seq
DB search
MQNMSLISLTSLTHSFPRESYACTMTTSHMNGHVSESESAGTSDGLDSSGHWHREMAVDC
PGDLGARTLPVRRSAQLERIRQQQEDRRRREEEGRNRLELEVNSSMRLKKLAQNPKVGID
NPTFDPLEGPGMSLGQLQGFSGSPRLLDLEELLMSLKQVQHCLGDAQSQEDVDLVLQLVQ
KPDFQKAFNIHNAVALHMNRPSPPFPLTDRAQSLVQEVQVMLQSSSQKEGLDLSTLLKSP
HMLALMLAHDSVAEQEMQPEPASPLDNPCETFTQWGGETVRIVRIEKAKDIPLGATVRND
MDSVIISRIVKGGAAEHSGLLHEGDEILEINGVEIRGKDVNEVFDILAEMHGTLTFILIP
SLSTKPPPIKESVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPNWWQAYR
DGDEENQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKLLYNANK
TDDYDNEEILTYEEMALYHQPANRKRPIALIGPPNCGQNDLRQRLLLSDPDRFGGAVPHT
TRNRRDGEVNGRDYHFVSRQVFELDAAAGKFIESGEFEKNLYGTSTDSVRQIINSGKICL
LCLHTQSLKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELRDIIEKAREMEQN
FGHLFDAAIVNTDQDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacatgtccctcataagccttacatctctcacacactcctttccacgtgaatca
tatgcctgcactatgaccacctcccacatgaatggccacgtaagcgagtcagaatcggcg
ggcaccagcgacggcctggactcgtctggccactggcacagggagatggctgtggactgc
ccgggtgacttaggcgcccgtacgctgcccgtacggcgcagcgcccagctggaacgcata
cgccaacagcaagaggaccgcaggaggagggaggaggagggccgtaaccggttagagctc
gaagtcaactcctccatgcgcctcaagaagctagcgcagaaccccaaggtgggcattgac
aaccccacctttgatcctctggagggtcctggcatgtccctggggcagctgcagggcttc
agtgggtcaccacgactgttggacctggaggagttgctcatgtctctgaagcaggtacag
cactgtctgggtgacgctcagagtcaggaggacgtggatcttgtccttcagcttgtacag
aagcctgacttccagaaagcctttaacatccacaatgctgtggctctacacatgaaccgg
cccagtcctccctttcccctcacagaccgcgcacagagccttgtgcaggaggtccaggtc
atgctgcagagcagctcacagaaggagggtctggacttgagcacattgctcaaaagccct
cacatgctggccctcatgctggcccatgacagtgtggcggagcaggagatgcagccagag
cctgcaagtccacttgataatccatgtgagaccttcacacagtggggaggtgagactgtc
aggatcgtacgcatagagaaggccaaggacatccctctgggagccacggtgagaaacgac
atggacagtgtaatcatcagccggattgtgaagggtggggcagcagagcacagtggtctg
cttcatgaaggcgatgagatattggagattaacggggtcgagattcgtggcaaagatgtc
aatgaagtgtttgatattctggcagagatgcacggcacgttgacgtttattttgattccc
agcctaagcactaaacctcctcctattaaagagtctgtggtccatgtgaaggcacacttt
gactatgacccttctgacgacccgtatgtcccgtgccgggagctgggcctgtgctttcag
aagggggacattttacacatcatcagccaggacgacccaaactggtggcaggcctacaga
gacggggatgaagagaaccagcctttagccgggctcgtgccaggtaagagctttcagcaa
caaagagaagccatgaaacaaacgatagaagaagataaggagcctgaaaaatcaggaaag
ctgtggtgtgcaaaaaagaataagaagaagcggaagaaactgctgtataacgcaaataag
acagacgactacgataacgaggaaattctcacctacgaggagatggcactgtatcaccag
ccagccaatcgcaaacgccccattgccctgattggccctccgaactgcgggcagaacgac
ctgagacagagactgctgttgagtgaccctgaccgctttgggggtgccgttcctcacacc
acacggaaccgcagggatggcgaagtgaacgggcgagactaccactttgtgtcgcggcag
gtcttcgagctggatgctgcggcggggaagttcatcgagtcgggagagtttgagaagaac
ctgtacggcaccagcacggattctgtgcggcagatcatcaacagcgggaagatctgcctc
ctgtgtctgcacactcagtctttgaaggtgttgcgcagctccgacctcaagccgtatata
atctttatcgcaccgccgtcccaggagcgcctgcgtgccctcttagcgaaagataacaag
aacccaaagccggaggagctgagggacatcatcgagaaggccagagagatggagcagaac
ttcggccacctgtttgatgctgcgattgtgaacactgaccaggacaaggcgtatcaggag
ctgctgcgcctcatcaacaaactggacacggagcctcagtgggttccttcatcttggctg
cgctga
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