Clarias gariepinus (North African catfish): 128535484
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Entry
128535484 CDS
T10780
Symbol
zranb1b
Name
(RefSeq) ubiquitin thioesterase zranb1-B
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128535484 (zranb1b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128535484 (zranb1b)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128535484 (zranb1b)
Peptidases and inhibitors [BR:
cgar01002
]
Cysteine peptidases
Family C64
128535484 (zranb1b)
Ubiquitin system [BR:
cgar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
128535484 (zranb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
PHF5
Motif
Other DBs
NCBI-GeneID:
128535484
NCBI-ProteinID:
XP_053365382
LinkDB
All DBs
Position
13:15773418..15786195
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AA seq
712 aa
AA seq
DB search
MTDFQPKWSCEYCTYENWPSAIKCTMCRAQRPTGPIITEEPFKSSSSLSSHLCSTQEGSS
VLICPDSSARPRVRVTDETPEIASKWSCQMCTYLNWPRAIRCTQCLSQRQQGPQQGPQRL
SDGPHTSEPGCRLPAPTATDPCEEYNDRNRLNTRVQHWACSACTYENWPKTLRCVVCDHP
KPSDTVLQEPQPESTMALSIVNEQERTAGGGGMGGSKMVQRRLSPPLPAGQAEVQIELAS
GAVGAQEENETDFKKLKQIRNRMRRSDWLFLNACAGVVEGDLAAVEAYKSSGGDIARQLT
SDEVRLLNRPSAFNAGFTLVHLAIRFQRQDMLSVLLTEVSQQAAKCIPAMVCPELTEQIR
REVAAALHRRKGEFPCYFFTDITTFTLPADIEDLPPNVQEKLFDEVLDRDVQKELEEESP
IINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKSLHDSLHDCSHW
FYTRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHVFVLAHILRRP
IIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEPSFCWKSPIALGYTRGHFSALVAMENDG
YDNRGAGANLNTDDDVTVTFLPLVDSDRKLLHVHFLSAQEMGTEEQQERLLRQWLDCCVT
EGGVLVALQKSSRRRSHPLVTQMVEKWLDGYRQLGTCPALSDGEEEEEDDDE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttccagccgaagtggagttgcgagtattgcacgtacgagaactggccatcc
gccatcaagtgcactatgtgtcgcgcccaacgccccaccggacccatcatcaccgaggag
ccgtttaagagcagctccagcctcagctcgcacctgtgctccacacaggagggctccagt
gttctcatctgccctgactctagtgcccgaccccgagtacgcgtgaccgacgagacacca
gagatagccagcaaatggtcatgccagatgtgcacctacctgaactggcctcgtgccatc
cgctgcactcagtgcctcagtcagaggcagcaaggaccacagcagggccctcaaaggctc
tcagatggcccgcacacatctgaaccaggctgtcgacttcctgcgccgacggccactgat
ccctgtgaggaatacaatgaccgtaatcgtctaaacacgcgtgtacagcactgggcttgc
tcagcctgcacctatgagaactggcccaagaccttaaggtgtgtagtgtgtgaccaccct
aagccgagtgacaccgtgctccaggagccacagcccgagagtaccatggccctgtctata
gtgaacgagcaggagaggacagcagggggagggggtatggggggcagtaaaatggttcag
aggaggctttcgccccctctgcctgctggccaggctgaagttcagattgagctggcatct
ggggcagttggcgctcaagaagagaacgagacggactttaagaaactcaagcagatcagg
aacaggatgcggaggagcgactggctttttctcaatgcatgtgcaggtgtggtagagggt
gatttggctgccgtcgaagcctataagtcatcaggtggtgacattgcacgtcagctgacc
tcagacgaggtccgcctgctgaatcgtccatctgcgtttaacgccggcttcactctagtg
caccttgccatccgctttcagcgccaggacatgctctctgtgctcctcactgaggtgtct
cagcaggcagctaagtgtattccagccatggtatgtcctgaattaactgagcagatccgt
cgggaggtggctgctgcgctacaccggcgtaaaggagagtttccctgttacttctttact
gatatcactacctttactcttccagctgatatcgaagaccttcctcctaacgttcaagag
aagctgtttgatgaggtgttggatcgagatgtacagaaagagcttgaggaggaatctcct
ataataaactggtctttggagctgggcacgcgactggacagccggttgtacgctctgtgg
aaccgcactgcaggagactgccttctggactcggtgctgcaggccacatggggcatctat
gacaaagattccgtactgagaaagagcctgcatgacagtttacatgactgctcccactgg
ttttacacccggtggaaagagtgggaatcatggtactctcagagttttggcttgcacttc
tctctgagagaagaacagtggcaggaagactgggcttttattctatcactggccagtcag
ccgggggcgagtttagagcaaactcatgtgtttgtgctggcccatatccttcggcggccc
atcattgtgtacggcgtgaaatattacaagagctttcgaggggagacgctgggatatacc
cgcttccagggtgtgtatctgcctctattgtgggagccgagtttttgctggaagagcccc
atagcactgggttatacacgaggtcacttttcagccctggtcgccatggagaatgacggc
tatgacaaccgcggtgcgggcgccaacctaaatacagacgatgatgtcactgttactttt
ctgcctttagtagacagtgacaggaagctgctacatgtccactttctgtcagcacaagag
atgggaacagaggagcagcaggagcgtttgttaaggcagtggctggactgttgtgtgaca
gagggtggagtcctggtggcattgcagaaaagctcgaggaggcggagtcatcctctggtc
acacagatggtagagaagtggttggatggctaccggcagctgggcacatgccctgccctt
tcagatggtgaggaagaggaggaggacgatgatgagtga
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