Clarias gariepinus (North African catfish): 128535494
Help
Entry
128535494 CDS
T10780
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128535494 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128535494 (capn3a)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
128535494 (capn3a)
Peptidases and inhibitors [BR:
cgar01002
]
Cysteine peptidases
Family C2: calpain family
128535494 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
CAPN13-like_C_EFh
EF-hand_1
LETM1_RBD
Motif
Other DBs
NCBI-GeneID:
128535494
NCBI-ProteinID:
XP_053365404
LinkDB
All DBs
Position
13:complement(18177608..18188489)
Genome browser
AA seq
716 aa
AA seq
DB search
MPYAPSGFFCDRLIRERERKDGEGSVSKPLRFSDQDFKTLKQNCLQKKVLFEDDTFPATV
ESLGYKELGHKASKVKNIVWKRPKDICENPEFIIGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSDNYAGIFHFQFWRYGDWVDVVVDDRIPTINNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKDLYKIMKKALQRG
SLMGCSIDTLVPARLETRTTTGLVKGHAYSVTAVDECKHSTQKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWTTISREEKDKLHLQNAEDGEFWMSFGDFMKNYTKLEICNLTPDALDDD
KLHKWTVSVNEGRWVKGCSAGGCRNYADTFWTNPQYRLRLLEEDDDLDNNEVACSFVVAL
MQKNRRKERKLGGNLFTIGFSIFEVPKEMHGNKQHMQKEFFQLNSSKARSKAYINLREVT
QRFKLSPGEYVIVPSTYEPHQEGEFLLRVFSEKKNISEEIENRIKADHPVPAPASAGDET
EEDQQFNDIFQHIASDEKQISANELKNVLNRMLTEHRDINKEIFSLESCRSMIAFMDVSF
MDGTGRLNLQEFRQLWNKIKQWQEIFKHYEAEQIGFIRSYDMRNAINDAGFHLNNPLYNI
ITMRYANESLNIDFDSFVNCLVRLEGMFRAFQAFDQGGDGTIRLSVLEWLQLTLYA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgcaccatcaggttttttctgtgaccggctaatccgggaaagagagagaaag
gatggagaaggatctgtgagcaaacctcttcgattcagtgatcaggacttcaagacccta
aaacagaattgtcttcagaaaaaggtgctatttgaagatgatacctttccagccactgtg
gagtccctgggttacaaggaactgggccacaaggccagcaaggttaagaacattgtctgg
aaaagacctaaggatatttgtgaaaatccagagttcatcattggaggtgctagcagaaca
gacatctgtcagggagacttgggagactgctggctactggctgccatcgcttgtcttact
ctaaatgaaaagctactttatcgagttgttcctcaagagcagagtttctctgacaattat
gcagggatctttcattttcagttttggcgttacggtgactgggtggatgttgtggttgat
gatcggatccctaccatcaataaccaactggtgttcaccaagtctgccgagaggaatgag
ttctggagcgctctccttgagaaagcatatgctaaacttcatggttcttatgaggctttg
aaaggtggaaacactgctgaggggatggaagacttcactggaggagtaactgagttctat
gaaatgaaggaggcacctaaagacctttacaagatcatgaagaaggccttgcagcgaggc
tccctcatgggctgctctattgataccttagtccccgcccgcctggagactcgcactaca
actgggctagtgaaaggtcatgcctactctgtaactgctgtggatgagtgtaaacacagc
acacaaaaagaatctaaagtacgtctggtacgtcttcgtaatccttggggacaagtggag
tggaatggaccttggagtgataattcaaaggaatggactaccatctctagggaagagaaa
gacaaactgcatctacagaatgctgaagatggagagttctggatgtcctttggtgatttc
atgaagaactacaccaagcttgaaatctgtaatctgacccctgatgctctggatgatgat
aagctccacaagtggacagtgtctgtgaacgagggccggtgggtaaaaggctgctctgct
ggaggctgcagaaattatgcagacaccttttggacaaacccacagtatcgtcttcgcctt
cttgaggaggatgacgacctggacaacaatgaggtggcctgctcctttgtggtggctctt
atgcagaaaaacagaagaaaagaacgcaaactgggtggaaatttattcaccattggattt
tccatctttgaggtgccaaaggagatgcatggtaacaagcagcacatgcagaaagaattc
ttccagttgaactcgtctaaggctcgcagcaaggcctacattaacttgcgggaggtgaca
cagcgcttcaagctgagccctggggaatatgtcattgtgccctctacctatgagccccac
caggaaggcgagtttctcctgcgtgtcttctccgaaaagaagaacatctctgaggaaata
gagaacaggatcaaagcggatcatccagtgccagctccagcctcagcaggggatgagact
gaggaggaccagcagttcaacgacatttttcagcatatagccagtgatgaaaagcagatt
tcagccaacgagttgaaaaatgtcctgaataggatgttgacagagcaccgggacataaat
aaagaaatcttcagtctagagagttgccgtagcatgatcgcctttatggatgtatccttt
atggatggaacaggcagactcaatctacaagaatttagacagttatggaataagatcaag
cagtggcaggaaatctttaagcactatgaagctgagcagattggcttcatcagaagctat
gatatgaggaatgcaatcaatgatgcagggttccatctcaacaacccactgtacaacatt
atcacaatgcgttacgccaacgagagcctgaacatcgactttgacagctttgtcaactgc
cttgtgcgtttggaggggatgttcagagctttccaggcctttgatcagggtggagatggc
actattaggctgtctgtactggagtggctccagttgactctgtatgcctaa
DBGET
integrated database retrieval system
