Clarias gariepinus (North African catfish): 128535523
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Entry
128535523 CDS
T10780
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128535523 (stxbp5b)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128535523 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
128535523 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_NUP159_NUP214
Lgl_C
Beta-prop_VPS8
Synaptobrevin
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
128535523
NCBI-ProteinID:
XP_053365460
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All DBs
Position
13:complement(14351108..14387232)
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AA seq
1152 aa
AA seq
DB search
MKKFNIRKVLDGLTAVSSSSSSSSSASAQPGNRENDIIQESLQSEHFQLCKTVRHGFPYQ
PSAMAFDPVQKILAIGTQTGALRLFGRAGVECYCQHESGSAVIQLQFLINEGALVSGLAD
DSVHLWNLRQKIPAILHSLKFTRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGY
VIMWNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGSVVLWDLKSKKADYRYSYDEA
IHSVAWHHEGKQFVCSHSDGTLTTWNIRSPAKPAQIITPHGKQPKDGKKPEPCKPILKVE
YKTTRALGDPFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPND
YQEPYAVVALLEKDLVVIDLAQTGYPIFENPYPLAIHESPVTCCEYFADCPDDLIPALYS
VGSRQKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSVKFWDASALMLQVLYKLKT
AKVFEKARNKEEKPSTDIVDEDPFAIQSLCWCPESRMLCVAGVSAHVIVYRFSKQEITTE
EVQLLEVRMQSELNDVDSPDGGGDHASAVSTPGASSSPQSSVPQTHLSTSSNNSADGLRD
NVPCLKVRSTPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSAYGLVGFGNGNGLVVV
DYLQKTLLLNVSTAELYGSSDPHQRQPRSPRKARQPSGGLCDGHDSSASLEDRCKSPTSG
CVSSDSPCHSDDDNKPNFFERVKSKSRQLSKSVANDFAKISWKFSLAGDQKQDDAKDNSF
SRSRSSSVTSIDKESREVISSLHFCDSLFRKSDVAASPSLWVGTSVGTMLGISFNVPSTP
EQRLQQSVGVSFCGSVIRLKGGILHMALMDSSGSLQPPASECWYDLNAPEEEREKTRRRR
PASPPSSQENQDTHYAVVCSEKQAKVVALPSQNCIFEHNITETSYVLRADVVVMSAGICI
PCFCANGHIMALSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYS
QETCDNLQEMLGELFTPVETPEAPNKGFFKGLFGGGAQSLDREDLFGELSAGKASRSLAQ
HIPGPGGMEGMKGAASGVVGELARARIALDERGQKLGELEERTAAMMASADSFSKHAHDV
MLKYKDKKWYQL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcagaaaggtgttagacggcttgactgcggtttcttcctcttcc
tcttcctcctcatccgcatcggctcagccggggaacagggagaacgacatcatccaggag
tctctgcagtccgagcattttcagctctgcaagacagtacgacatggctttccttatcaa
ccttcagccatggcttttgaccctgtgcaaaaaatactggcaattgggacacagactggc
gcattaagactctttggccgtgctggtgtagagtgttactgccagcatgagagtggctcg
gctgtcatccagctgcagtttctcatcaatgagggggcgctggtgagtggtttggctgat
gacagcgtgcatttatggaatctgaggcaaaaaattccagctattcttcactcacttaaa
ttcaccagggagaggatcacatattgccatctccccttccagagtaaatggctttacatc
ggaacagaacgcgggaacattcatattgtcaatgtggagtcctttactctctcaggctat
gtcatcatgtggaacaaagccattgaactatcttcaaaaacccaccctggtcctgtggta
cacatcagtgataatcctatggatgagggaaagcttttgattggttttgaatgtggtagt
gttgtgttgtgggacttgaaatccaagaaagctgactaccgctacagctatgatgaggca
atccactcagtggcctggcaccatgaagggaaacagtttgtgtgcagtcattcagatggc
acacttaccacatggaatatacgctctcctgccaagccagcacagattattacaccacat
ggcaagcagccgaaggatggaaaaaagcctgagccatgcaaacccatactgaaagtagaa
tacaaaacaaccagagctttgggggatccttttatgatactgtctggcggtctttcatat
gatacagtgggacgcagggcctgcctgactgtaatgcatggaaaaagcactgctgtactt
gagatggactatcccattgtggatttcctaactctgtgtgaaactccctatccgaacgat
tatcaagagccttatgctgtggtggccctgctggagaaggatttagtagttattgacctc
gcccaaaccgggtaccctatctttgaaaacccatatcctctggccattcatgagtcccca
gtgacctgctgtgaatactttgcagactgtccagatgacctcatccctgcactttactct
gttggttccaggcaaaagaggcagggctacagtaaaaaggaatggcccatcagtggtggt
aattggggccagggcacacaaagctatccagagatcattatcacaggacatgctgatgga
tcagtcaaattttgggatgcttctgcattaatgctgcaggtgctgtacaagctaaaaaca
gccaaggtgtttgaaaaagcccgtaacaaggaagagaagccaagcacggacatcgtggat
gaagacccttttgccatccagagtctgtgctggtgcccggagagccgcatgctgtgtgtg
gctggggtctctgctcacgtcattgtttaccggtttagcaaacaggaaatcaccacagag
gaagttcagctgttggaggtgcggatgcagtctgagctgaatgacgtagactctccagat
ggtggaggagaccacgcatcagctgtatctacaccaggagcttcatccagccctcagtcc
agtgtaccacaaacacacctatccaccagcagcaacaactctgccgacgggctccgtgac
aacgtgccctgcctcaaggtaagaagcactccgctcaagcagtctccagggtaccaggtg
gaactggtcattcagctggtgtgggtcagtggggagccaccacagcagatcaccagcctg
gctgtcaactctgcctacggccttgtgggtttcggtaatggtaacggcctggtggtggtg
gattatcttcagaaaaccctgctgctcaatgtgagcactgcagaactgtatggctcctcc
gatccccaccagagacagccgcgctcaccccgcaaagccagacagccctcaggaggtctc
tgtgatggccacgatagttctgcttccttagaagaccggtgcaaatctcctacgtcaggc
tgcgtaagctctgactccccctgccattctgatgatgacaacaaaccaaatttctttgaa
agggtgaagtcgaaaagcagacagttatcaaagagtgttgccaatgactttgctaagatc
tcatggaaatttagcttggctggtgatcagaaacaagatgatgccaaggacaactccttt
agccgctcacgcagctccagcgtgaccagtattgacaaagagtcacgcgaggtcatctct
tctttgcatttttgcgactccctgttcaggaagagtgatgtggcggcgtcccccagcctt
tgggtgggcacctcagtgggcactatgctgggtatctcctttaatgttccctccacccct
gagcagaggctgcaacagtcagtaggcgtttccttctgtggctcagtaatccggttgaaa
ggaggcattttgcacatggcattgatggactcaagtggctctctacagcctcctgcctct
gagtgctggtatgacctcaacgcccctgaggaggagagggaaaagacacggcggcgccgg
cctgcctcacccccttcttctcaggagaaccaagacacccactacgctgtggtctgttct
gagaaacaggccaaagtggtggccctgccctcacagaactgcatctttgaacacaacatc
accgagacctcgtacgtgctgagggctgacgttgtggtcatgtcagctggaatctgcatc
ccctgcttctgtgccaacgggcatattatggctctaagtttgcccagtctgcggccactg
ctagacgtcaactatctgcctctgacggacatgcggatagcccgaaccttctgcttctcc
aacctgggccaggctttgtacctcacttcacctacagagatccagagaatcacctacagt
caggagacctgcgataacttacaggaaatgctgggagaactgttcactccagtagagaca
ccagaggctcctaacaaaggcttctttaaaggtctttttggaggtggggcccagtccctg
gatcgagaggatctctttggagaattgtcagcggggaaggcctcacgcagcctcgctcag
cacattcccgggcctggtggcatggagggtatgaagggggcagcgtcaggagtggtgggt
gagctggcacgtgcccgaatagctctagatgagagaggacagaagcttggtgaactggag
gagaggacagcagccatgatggccagcgcagactcattttctaagcatgcacatgatgtg
atgttaaaatacaaggataagaagtggtatcagctctga
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integrated database retrieval system
