Clarias gariepinus (North African catfish): 128535599
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Entry
128535599 CDS
T10780
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00562
Inositol phosphate metabolism
cgar01100
Metabolic pathways
cgar04020
Calcium signaling pathway
cgar04070
Phosphatidylinositol signaling system
cgar04081
Hormone signaling
cgar04082
Neuroactive ligand signaling
cgar04261
Adrenergic signaling in cardiomyocytes
cgar04270
Vascular smooth muscle contraction
cgar04310
Wnt signaling pathway
cgar04371
Apelin signaling pathway
cgar04540
Gap junction
cgar04621
NOD-like receptor signaling pathway
cgar04912
GnRH signaling pathway
cgar04916
Melanogenesis
Module
cgar_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
128535599
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128535599
04371 Apelin signaling pathway
128535599
04020 Calcium signaling pathway
128535599
04070 Phosphatidylinositol signaling system
128535599
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128535599
04081 Hormone signaling
128535599
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
128535599
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128535599
09152 Endocrine system
04912 GnRH signaling pathway
128535599
04916 Melanogenesis
128535599
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128535599
04270 Vascular smooth muscle contraction
128535599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128535599
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
128535599
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128535599
Endocytosis
Macropinocytosis
Phospholipase C
128535599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
EF-hand_like
C2
PLC-beta_C
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
128535599
NCBI-ProteinID:
XP_053365579
LinkDB
All DBs
Position
13:complement(13369759..13408018)
Genome browser
AA seq
1204 aa
AA seq
DB search
MADCFSCLIGQMAKAYEFNWKRLVPHFMQVGEYFDRFDEDPFVFEPHCFFRVDAFAFFIT
WKSEGKEGQVLECSLINSIRNTNVPKDPKILSAIETTGKSESDLEGRIICICSGTDLVNL
SFMYIVAPTISIAKQWTVSLRLLIHNTRANNVCPMTCLKKHWMKLSSLTNVSGKIPVRSI
TRTFASGKTEKVIFQALKDLGLPSGKNDEIEPNVFTFGKFYSLTQKICPRTDIEALFKKL
CEDKNDYLNIEQLVSFLNENQRDPRLNEILFPVYDPKRARQIIETYETDEKLRMKGVMTC
DGFCRYLMSDENAPVFLDRLELYQEMDHPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQV
LLSGCRCVELDCWDGKGEDQEPIITHGKAMCTDVLFKEVIQAIKETAFVTSEYPVILSFE
NHCSRHQQYKLARYCEDIFGDILLKQPLEDFPMVPGQPLPSPNALKGKILIKNRRLKPEV
EKKQLDHFRKHMEAGETNTIMSEDENEEDPGSAEPVDEAHPERICGNLVISQTNNSEGNM
LAAKKAGETNVADEQALIQSYTYVAATTNIHPYLSNIVNYAQAVKFLGFEEAEEKNIHYN
MSSFNESVGLGYLRTNAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVALNF
QTPDLAMQLNQGKFEYNGSYGYLLKPDFMRRPDRTFDPFSETPVDGVIAATCSVQVISGQ
FLSDKKIGTYVEVDMYGLPTDTIRKEFRTRMVMNNGLNPVYNEEPFVFRKVILPDLAVLR
IAVYDDNNKLIGQRILPLDGLQAGYRHISLRNEGNNPLSLPTIFCNIILKTYVPDGFGAI
VDALSDPKKFLSICEKRTDQMRAMGIETWEIAEVPNDSPKRSKKGKTNHFKSASPQKISE
QHFTSSGQNLSVSSNKAVSPTPLNMPEVTIDDLKEMKAYIKLVKKQLKEVDALKKKHAEA
YTALQRSHCTQVDKMATQHEKEKRALEKQFEKSGKKVSECNLETRGEIEKKIKTIITDHK
TKVKKTLAAQAEELAEIAKTHNAENQDLGDQHVLQQCELLRKLMLMTQEQQTQQLTYLHE
RQSKEMRANQAKSSMENSKAISQDKSIKNKAERERRVRELNSNNTRRFLIERKKLAVNQS
KELDQLQTVQREQLEQLDKYNAELLKSHLSTSPCQDQNDTAHADEEHRGEKGLSPSGALN
SITT
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggctgactgcttctcttgtcttataggacaaatggccaaagcatatgaatttaactgg
aagaggctggtacctcactttatgcaagtaggggaatattttgacagatttgatgaggat
ccatttgtctttgagcctcattgctttttcagagtggatgcctttgcattctttatcaca
tggaaaagtgaaggaaaggaaggtcaggttctggagtgctctttaatcaacagtataaga
aacacaaatgtgcccaaggatccaaagattctgtcagcaattgagaccacagggaagtct
gagagtgacttggagggcaggatcatctgcatatgcagtggcacagacttggttaacctc
agcttcatgtacatagtggcaccaaccattagcattgcaaagcaatggaccgtcagcttg
cgtttattgattcacaacacccgtgcaaacaatgtgtgccccatgacctgtctcaagaaa
cactggatgaagctgtcgtctttgaccaacgtgagtggaaaaatcccggtgagaagcata
acaagaacttttgcttccggcaaaactgagaaggttatattccaggcgctcaaagacctt
ggtctcccaagtggaaagaatgatgaaattgagcccaatgttttcacctttggcaagttt
tactccctcactcagaagatttgccccagaactgacattgaagcactgttcaagaaactc
tgtgaagataagaatgattatttaaacatagagcaattagtcagctttttgaatgaaaac
caacgggaccctcggctaaacgagatactttttccggtttatgaccccaaacgtgcaagg
caaatcatagaaacctacgagactgacgagaagcttcgaatgaaaggagtgatgacatgt
gatgggttttgtcggtacctgatgtctgatgagaacgcaccagtgtttcttgaccgactg
gagctctatcaggagatggatcatccactttcacactacttcattaactcctcacacaac
acctacctgactggcaggcagtttggaggaaagtcttctgtggagatgtaccggcaggtc
ctgctctctggttgcagatgtgtggagctggactgctgggatggaaagggagaggaccaa
gagcccattattactcatggcaaggccatgtgcacagatgtgcttttcaaggaggttatt
caagccatcaaagaaactgcatttgtgacttctgaataccctgtgattctttcatttgag
aaccattgctcgaggcatcaacagtataagctggcccgatactgtgaagacatatttgga
gatatacttctcaagcaacctttagaagacttcccaatggtgcctggacagcctttgcct
tcaccaaatgctcttaaaggaaaaatcctcataaaaaacagaagacttaaacctgaagtt
gaaaagaagcaactggatcacttcaggaagcatatggaagctggagagacgaatacaata
atgtcggaggatgagaatgaggaagatcctggctctgcggagcccgtggatgaggctcac
ccagaacggatatgtggaaacctcgtcattagccagacgaataatagtgaaggaaatatg
cttgcggcaaaaaaggctggtgaaacaaatgtggcagatgagcaagctttgatccagtct
tacacatacgttgcagcaaccactaatattcacccctacctgtccaatatagtaaactat
gctcaggctgtcaaattcctgggttttgaggaagctgaagagaaaaacatccactacaac
atgtcttccttcaacgagtcagtaggattgggatacttacggaccaatgctattgaattt
gtcaactacaacaagcgccagatgagtcggatataccccaaaggaggcagagtggactct
agtaattatatgcctcagatattctggaatgcaggctgccagatggtagcgctgaacttt
cagacccctgatttggcaatgcagttgaaccaaggaaagtttgagtacaatgggtcatac
ggttatttgctgaagccagatttcatgcgtcgaccagaccgcacatttgaccctttctca
gagacccctgtggatggagtgattgcagccacttgcagtgtccaggtaatttcaggacag
tttttatctgacaagaagatcggcacatatgtggaggtggatatgtatggcctgcccact
gataccattcggaaggagtttcgtactcgaatggtgatgaacaatggcctgaaccctgta
tacaatgaggaaccatttgtttttagaaaggtaatccttccagaccttgcggtgctcaga
atagcagtgtatgatgacaacaataagctgattggtcagaggattctccccttggacggt
ctgcaggctggctacagacacatctccctacgaaatgagggcaacaatcccctctcctta
cccaccatcttttgcaacatcatcctcaaaacatatgtacctgatggatttggagccatc
gtggatgctttgtctgacccgaaaaaattcttatccatttgtgaaaagagaacagaccaa
atgagagccatgggcattgagacgtgggagatagctgaggtgccaaatgacagcccgaag
aggagtaagaaaggaaagacaaatcattttaagtctgcgtcacctcagaaaatttctgag
caacactttacatcatcaggacaaaacttgagtgtttcctcaaacaaggcagtgagtcct
acacctttaaacatgcctgaagttaccatcgatgacctgaaagaaatgaaggcgtatata
aaactagtaaaaaagcagctgaaggaagtcgatgcattgaagaaaaagcatgcagaggca
tacactgcattgcagagatctcactgcactcaggtggacaaaatggccacacaacacgaa
aaagaaaagcgggccttggaaaaacaatttgaaaaaagtggcaagaaggtcagtgaatgc
aacttggaaaccagaggggaaatagagaaaaaaataaagaccattattacagaccacaaa
acaaaggtgaagaaaacgcttgctgcacaagcagaggaattggctgagattgcgaagacc
cacaacgctgagaaccaggacctcggtgaccagcatgtgctacagcaatgtgaactactg
cgaaagttaatgttaatgacacaggaacagcagacacagcagctcacatatcttcatgag
cgacagagtaaggaaatgagagctaaccaagcaaagtcatcaatggagaacagtaaagcc
attagtcaagacaaaagcatcaaaaacaaggctgaaagagaacgaagagtccgagaactg
aacagtaacaacacaagaagattcctcatagaaagaaaaaagcttgccgtaaatcagtcc
aaagagcttgaccagctccagacagttcaacgtgaacaactggagcagctggataaatat
aacgccgagctcttgaagtcacacctttcaacatctccgtgccaggaccagaatgacaca
gctcatgcagatgaagaacacagaggtgaaaagggtctaagtcccagtggtgccctaaac
tccataaccacatga
DBGET
integrated database retrieval system
