Clarias gariepinus (North African catfish): 128535606
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Entry
128535606 CDS
T10780
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128535606 (trappc12)
Membrane trafficking [BR:
cgar04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
128535606 (trappc12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_6
TPR_16
TPR_17
TPR_MalT
ANAPC3
TPR_14
TPR_9
TPR_11
ARM_TT21_2nd
ARM_TT21_5th
RPN7
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
128535606
NCBI-ProteinID:
XP_053365597
LinkDB
All DBs
Position
13:434562..468810
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AA seq
789 aa
AA seq
DB search
MDSAEDAAQRPSTLDLAGIEDDVNAARASSDAADMSGLPTVADALFQEETIDLDVEAFVS
PQDDSAASGSVTDKLNDQMMESVMISDSPNSEEEDVPIDCLLEHTDDKESLNSKEPEEDK
VKEEKTEAGSEQTTPDVAVEPETPPALVEKEKTEDSHGDGTEDDVTAMTHTPGTPKAKAT
ELEDANPVIKDEPIPVCTIFSQGVQNKAQSLVPDGFQPTLVKSPSFTTGHNETPSKLAPL
VSQPSPSLSKFFTDNGTVNPASDFFDSFTTSSSFISVSNPNAESPTSPAPRERQLSSGGL
LPDGGTAGTYFGPAPHESTARPGTGPAEPAMNITKLQAVFSGSDDPFASALSMSEVDRRH
DAWLPSEETRRVLISVATQQVNPVHVDRDKLSMPGLKFDNLQGDAVKDLMLRFLGDQAAT
KRQVLTANSVEQNFLGLKQLIATKNWRAAVDLTGRLLTAHGQGYGKSGQPSAHTADTLQL
WFVRLALLVKLNLFQNAELEFEPFGYLDQPDLYYEYYPTAYPGRRGSMVPFSMRVLHAEL
PQYLNKPQESLDRLHSMKSICQKILTNLEEGLAEDGSMVTLTQENRQASIQLWRSRLCRV
MYSMANCLLMMKDYVLAVETYQSIIQYEPQQRVQLLSGIGRIFLQIGDIRTAEKYFQEVE
KVGQEKGPGLTHDTAISMNRAFVYLSQNNYADAHTCFSSVLKIDPNNPVANNNAAVCLLY
LGRLKESLGQLESLVQQDPALYLHESVLFNLTTMYELESSRSTQKKQALLEAVAGREGDS
FNTQCLKLV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgctgaggacgcagctcaaaggccttccactctagatctcgcaggaatagag
gacgacgtaaacgcagcccgtgcttcctcagacgccgccgatatgagcggccttcccacc
gttgcagacgctctcttccaggaggagaccattgacctggacgtggaagcgttcgtctct
cctcaggacgacagcgccgcttccgggagcgtcacggataagctgaatgatcagatgatg
gagagcgtcatgatctctgattctcccaatagcgaggaggaggacgtccccatcgactgt
ctgttggagcacacagatgacaaggagtctcttaactccaaagagcccgaggaggacaaa
gtgaaagaggaaaagacagaggctggaagtgaacagaccacacctgatgttgctgttgaa
cctgagacacctccagctttagttgagaaagagaagacagaggacagtcatggggacggc
acagaggacgatgttacagccatgacacacactccaggcacccccaaagctaaagccaca
gagctggaagacgccaatcctgtgattaaggacgagcctattccagtgtgcacgattttc
agccaaggggtgcagaataaagcccagtcgctggtgcctgatggatttcagcccactttg
gtcaaatccccgagctttacaacaggccataatgaaactcccagtaaactagctcccctg
gtgtctcagcccagtcccagcctcagtaaattcttcaccgataacggcactgttaaccct
gcctcggacttctttgactccttcaccacgtcctcgtcttttatttcggtcagcaaccca
aacgcagagtctccgacgtccccggcccctcgtgagcgccagctgtcctcgggcggccta
cttccagacggaggcaccgcagggacttacttcggtcccgctccccacgaaagcacagcg
agacccgggacggggcctgcagagcccgcgatgaacatcaccaagctacaggcggtgttc
tcaggcagcgatgatccgtttgcgagcgctttgagtatgagtgaggtggacagacgccac
gacgcctggcttccctctgaggagacacggagagtgctgatctctgtagctacgcagcag
gtcaaccctgtgcacgtcgacagggacaagctgtccatgcccggactcaagttcgacaat
ctccagggtgatgcagtaaaggacctgatgctgcgtttccttggcgaccaggcagcgacc
aagaggcaggttctcacagctaactctgtggagcagaacttcctgggtctcaagcagctg
atcgccacaaaaaactggagggcagccgtagacctgacggggagactgctgacggctcac
ggacaaggctacggcaagagcggccagccgagcgcccataccgccgacacgctgcagtta
tggtttgtgcgtctggcactgttggttaagctcaacctcttccaaaatgccgagctggag
tttgagccgtttggttatctggaccagccggacctgtactacgagtactaccctacggcg
taccctgggagacgaggttcgatggtgccgttctctatgcgtgtgctgcatgctgaactg
cctcagtacctaaacaagccccaggagtctctggaccgcctgcacagcatgaaaagcatc
tgtcagaaaatcttgaccaacctggaggaaggactggccgaggacgggagcatggtgacg
ctcacacaggaaaacagacaagcctctattcagctgtggaggtcacgtctgtgccgggtg
atgtactccatggcaaactgtctgctaatgatgaaggactatgtgctggctgttgagacg
tatcagtccattatccagtacgagccacagcaaagagtgcagctgttgagtgggatcgga
cgcatctttctacagattggagacatcagaactgcagagaagtatttccaggaagtggag
aaagtcggtcaggaaaaaggaccaggcctcacccacgacactgctatttcaatgaacagg
gcatttgtgtacctgagccagaataattatgccgacgcccacacgtgtttctccagcgtc
ttgaaaatcgatcccaacaatcctgtggcgaataacaatgcagcggtgtgcttactgtat
ttgggccgtctaaaggagtctctgggtcagctggagagcctggtgcagcaggaccctgca
ctctacctgcacgagagcgtgctcttcaacctgaccaccatgtacgagctggagtcctca
cgcagcacacagaagaaacaggctctgctggaggccgtggccgggcgcgagggcgacagc
tttaacacccagtgcctcaaactagtgtaa
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