Clarias gariepinus (North African catfish): 128535661
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Entry
128535661 CDS
T10780
Symbol
arid4a
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 4A
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128535661 (arid4a)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128535661 (arid4a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
ARID
128535661 (arid4a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
128535661 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
128535661
NCBI-ProteinID:
XP_053365676
LinkDB
All DBs
Position
13:14807589..14829791
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AA seq
1385 aa
AA seq
DB search
MXLPRLGXPIGFRETQPWLNSLLFRLCFATQASGERTYRSIDQNQAGLPQTASTMKVADE
PAYLTVGTDVSAKYRGAFCEAKIKTVKRMVKVKVVLKGDSTSQVVQDDQVKGPLRVGSTV
EVKSAEGVFIEAVISKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETLDQLPLT
NPEHFGTPVIGKKTNRGRRSSQAVVEDEKESSSSEEEEDDRRRLSDDLLGKVAFVQTGPD
QACWFHALVISPSCNDDITVKKDQCLVRSFADSKFHTVGRNDVQELCVETMCESEHSDKI
GFKEALLFIKTKQIPDTWKMDMSEILESSSSDEGEGKESEEEEKEPEPEEPDDEPDPEER
DHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVHHHGGCDNIESGSVWKQVYMDL
GIPILNSAASYNVKTAYKKYLYGFEEYCRSAQIQFRTVHHNEPRPVVQPDVKTVKQEKEI
ESEDKGDQTQQAKAEPEASKDQPDGDESDGEDEKTRKDICSPRGRRRCTVTPLKMEGKEP
VKQEKVKEEKKREEVRVGEGSGEEQKEKTEGDNLGKRRSRRLEESDKDSDEDDQEEDDDE
DDDSEKSRLRERDEREDEDGGEESEHSVTGTKVKVKYGKGKTQKIYEANIKNTETDDGEV
LYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKRRQKKKVKNKDDGEKEEDKPPKPVAKRG
RPPLKSTPPGTSRSVSKTSNSESRPGTKTPRLSDTLPNGEGTPRRRTRKTSGMYDSDRAS
NDSGNSSDESEGEDTPEKKPEWAEKTDPATARKQEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEKGKVEDAEVEPVGPKIPQEKPQSPEASEPEKPEEEAAMSPDSGDGSPKLRAKRARQ
REPGSETLIQLPAATNQAEPKGPGTLPRQPKKPQDSEHISTTEQVPETAGSDTDSATEDI
GPPERSCIAKRKATEFWTPEKKIRLEDKLEPKTPSPEKKSDNERPKENVQETEEPLAPPV
PTVVVAPPEVPEVKTEMPALTKEVQIRVEPLSSLCTIKEDSSAITDEETMPQIGAEALMC
HEVDLDDPEEKDKPSGEEPLVLREEKTNASNLAVAQVQAQQPSFHLPPSLTTAAPPQLCS
PSSAPSPDESHSTKSESDATIEADSMAESHEGLCENFDASASSSNSSISLQERDAKDKGQ
KRLHDCNSGLSAKKQKRNQKRLGAASAAEKNGAGHSSDSEDLSAMDTSTKLTPVKHSSLA
KAHKLSRSPGHASPSSKDMEKDKHKDKQSFPSPRTYKWTFQLNELDNMSSTERISFLQDK
LQEIRKYYMSLKSEVASIDRRRKRLKKKEREVSHTTASTSSGSSDTGMSPSSASPTQNTV
AVECR
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgtagctaccgcggttagggtagccaatcggattccgagaaacacaaccttggctcaac
agcttgttatttcgtttatgctttgcaacccaggcgagtggtgagcggacatacaggagt
atcgaccagaaccaagctggactcccccaaacagccagcacaatgaaggtagcagatgag
cctgcctacctgactgtgggaacggatgtgagcgctaaataccgaggtgccttctgtgag
gcaaaaatcaagactgttaaacggatggtaaaagttaaggtggtgctcaaaggagacagt
acctcacaagtcgtgcaagatgaccaggtcaaaggacctttgagggtgggttccacagtg
gaagtcaagagtgcagaaggagtttttattgaagctgtcatcagtaaacttacagacgct
agctggtacactgtggtttttgatgacggagatgagaaaacactcagaagaacgtcactg
tgtcttaaaggtgaacgacattttgcagagagtgagactttggaccaactgcctttgact
aacccagagcactttgggactcccgtcattgggaagaagactaatcgaggacggcggtct
tctcaggcagttgtggaggacgagaaggagtcttcatctagcgaggaggaggaagacgac
agacggagactcagtgatgatctcttggggaaggtggctttcgttcagactgggccagac
caagcgtgctggttccatgccctggtgatctctccaagctgtaatgatgacataactgtt
aaaaaggaccaatgcttagtgcggtcgtttgctgattccaaatttcacactgtgggccgc
aatgatgttcaagagttgtgtgttgagaccatgtgtgaatcggagcactctgataaaatc
ggatttaaggaggcactgctctttataaagaccaagcagatccctgatacctggaagatg
gatatgagtgagatcttggaatcttccagcagtgatgagggtgaaggcaaggaaagcgag
gaagaagagaaggaaccagagccagaagagcctgatgatgagccagacccagaagagagg
gaccacttcctacagcagttgtacaagttcatggaggacagaggcacaccaattaacaaa
cctcctgtgctgggctacaaggatctgaacctcttcaagctcttcaggctggttcatcac
catggtggctgtgacaatattgagagtgggtctgtatggaaacaggtctatatggatttg
ggaattcccatcctgaattcagcagcttcttacaatgtgaagacggcttataaaaagtac
ttgtatggatttgaagagtactgccgatccgctcagatccagttcaggaccgtgcaccat
aacgagcctaggccagtcgttcagccagatgtaaagactgttaagcaggaaaaggagatc
gagagtgaagacaagggagaccagacccagcaggctaaagctgagcctgaagccagcaaa
gaccaacctgatggggatgagtcggatggcgaggatgagaaaacccgcaaagacatctgc
tctcctaggggccgacgacgctgtacagtgactccattaaaaatggaagggaaggagcct
gtcaaacaggaaaaagtaaaggaggagaaaaagcgtgaggaagtgcgagtgggagaaggc
agcggagaggaacagaaggaaaaaacagagggagataatttggggaagcgacgcagtcgg
cgcctagaagagtctgacaaagattcagatgaagatgatcaggaggaagatgatgatgaa
gatgatgacagtgaaaaatccagacttagagaaagagatgagagggaggatgaagacggc
ggcgaagagtctgagcactcggtcactgggacaaaagtcaaggtcaaatatggcaaaggg
aagacccagaaaatctatgaagccaatattaaaaacacagagactgacgatggagaagtc
ctttatctggtccattactacgggtggaatgtgaggtatgacgaatgggtgaaagctgat
aggataatatggcctgttgataaaggaggaacaaagagaagacaaaaaaagaaagtgaag
aacaaagatgatggggagaaggaggaagacaaaccgcccaaaccagtggcaaaacgtggc
cgtcctccactaaaatccacccctcctggcacctcccgcagtgtatccaaaacttctaac
agtgagagcagacctggcactaaaaccccccgtctctcagacactctacccaatggagag
ggaactcctcgtcggcgcacaaggaaaacctctggcatgtacgattccgacagggcatct
aatgattcaggaaactcatcagacgaaagtgagggtgaggacactcctgagaaaaagcct
gaatgggcagaaaagacagatcctgcaacagcccggaagcaggaggaggaggaggaggag
gaagaagaagaggaggaggaagaagaagaagaggaggaggaggaggaagaagaagaagaa
gaagaggaggagaaaggaaaggtggaggatgctgaggtcgagcccgtgggtcccaaaatc
cctcaggagaaaccacaatcgccggaggcaagtgagccggagaaacctgaggaagaagcg
gcaatgtcgcctgactctggtgacggttctcccaaactgagagcaaaaagggctcgtcaa
agagaacctggctctgagactctgatacagctgcctgctgcaacaaaccaggcagagccc
aaggggcctggcactcttcctcgccagcctaagaagcctcaggatagtgagcacattagc
actacagagcaagtgcctgaaacagctggctctgacacggattcagccactgaagacatc
ggcccaccagagaggagttgcatagccaagcgcaaagccacggagttttggactccagaa
aagaagattcgccttgaggacaaattggagccaaaaactccgtcaccagagaagaaatca
gacaacgaacgaccaaaagagaatgttcaagagacagaagaaccccttgcaccaccagtt
ccaacagtagtagtagctcctcctgaagtcccagaggtcaagacggaaatgcctgctctt
accaaagaagtccagataagagtagaacctctttcaagcttgtgcacaattaaggaagac
tcttcagcaatcactgatgaagagacgatgccgcagataggcgcagaggcattaatgtgt
cacgaggtagatctagatgaccctgaagagaaggacaagccatcaggagaggagccactg
gtgctaagggaggaaaagactaatgcttccaacttggccgtagctcaggtgcaggcccag
cagccctccttccatcttcctcctagcctgacgacagcagcgcctcctcagctgtgttct
ccatcctccgctcccagcccagacgagtctcacagcaccaaaagtgagagcgacgccacc
atcgaagcagacagcatggccgagtcacacgagggactctgtgagaactttgacgctagt
gcgagctccagcaactccagcatttccctgcaggagagggatgccaaggacaaaggtcag
aaaagattgcatgactgcaacagtggcttatctgccaagaagcagaaacgtaaccagaaa
cggttaggagctgcttctgctgcagaaaaaaacggagcaggtcacagcagcgacagtgaa
gacctgtctgccatggacacctctactaaactgactccagtaaaacactccagcctggcc
aaggcccataagctctctcgctcccctggccatgcttctcccagcagtaaagacatggag
aaagacaagcacaaagacaagcagtccttcccctctccacgcacatacaaatggactttc
cagctgaatgagctagacaacatgtcgagcactgagagaatttcctttttacaagacaag
cttcaggaaatccgaaaatactacatgtcgttgaaatcggaggtggcctccatcgacagg
aggcggaagagattaaaaaagaaggagagagaagtgtcccacaccacagcatctacatcc
tctggctcatcagacacaggcatgagtccatcctcagcttcacccactcagaacactgta
gctgtggagtgcaggtga
DBGET
integrated database retrieval system
