KEGG   Clarias gariepinus (North African catfish): 128535686
Entry
128535686         CDS       T10780                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03008  Ribosome biogenesis in eukaryotes
cgar03013  Nucleocytoplasmic transport
cgar03250  Viral life cycle - HIV-1
Brite
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     128535686 (xpo1b)
Ribosome biogenesis [BR:cgar03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    128535686 (xpo1b)
  Pre-60S particles
    128535686 (xpo1b)
Transfer RNA biogenesis [BR:cgar03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    128535686 (xpo1b)
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     128535686 (xpo1b)
SSDB
Other DBs
NCBI-GeneID: 128535686
NCBI-ProteinID: XP_053365718
LinkDB
Position
13:5362082..5386897
AA seq 1075 aa
MHSSMPAVMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEH
PDAWTRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSD
AASVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSE
EVFDFSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWI
PLGYIFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQ
MLPLNTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLL
VSEVEETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKV
RLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIM
TEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDN
KAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCR
RHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEK
YMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLD
MLNVYKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENF
VPPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITNEIPQIFDAVFECTLNMINK
DFEEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQI
LYTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEG
KISMTLNPASPMSNQAFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLR
DFLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3228 nt   +upstreamnt  +downstreamnt
atgcatagctctatgccagcagttatgacaatgttagccgaccacgcagccagacagctg
ctggacttcaaccagaaactggacattaatctcctggataatgtcgttaactgcttgtac
catggcgtgggaccgcagcaaagaatggcccaggaggtccttacacatttaaaggagcac
ccagatgcgtggactcgagtggacaccatcctggaattctctcagaacatgaataccaaa
tactatgctctgcagattctggaaacagttataaaaacaagatggaagattctgcccaga
aaccagtgtgaaggaattaaaaaatacgttgtgggcctcattatcaagacgtcttctgat
gcagcaagtgtggagaaggagaaggtgtacattggaaaacttaacatgattttagttcag
atcttaaagcaggagtggcctaagcactggcccacgtttatcagcgacattgtaggagca
agccgtaccagcgagagcctctgccagaacaacatgatcatcctgaagctgctcagtgaa
gaggtgttcgatttctccagtggacagatgacccaggttaaagccaagcatctcaaggac
agcatgtgtaatgagttctcgcagatctttcagctctgccagttcgtgatggaaaactcc
cagaatgctcctttggtgcacgccaccttggaaacactgcttcgttttttaaattggatc
ccactgggctatatcttcgagaccaaactcatcagcactctcgtgtacaagttcctcaac
gttccaatgtttcggaatgtgacactcaagtgtctgactgagatcgccggtgtgagtgtg
agccagtatgaggagcaatttgtcacactgttcacgctcaccatgatgcagctcaaacag
atgctgcctctgaacacgaacatccgtctggcctacgccaacgggaaggatgacgagcag
aacttcattcagaacctcagcctgtttctctgcaccttcctcaaagagcacggccagctc
atagagaaaaggctcaacctgcgcgagacccttatggaggctctgcactacatgctgctg
gtgtccgaggtggaggagaccgagatctttaagatttgtctggagtactggaaccacctg
gcagccgagctgtacagagagagtccattcagcacctccacttccccactgctctctggc
agccagcactttgatgttccaccacgcaggcagctctatctacctgtactctccaaggtg
cgtctgctgatggtgagccgcatggcaaagccggaggaggtgctggtggtggaaaacgac
cagggtgaggtagtgcgagagtttatgaaggacacagactctatcaacctgtacaagaac
atgagagagacgcttgtgtatttgacccatttggactacgcagacacagagcggatcatg
acagaaaaacttcataaccaggtgaacgggacagagtggtcctggaaaaacctgaacaca
ctgtgctgggccatcggctccatcagcggagccatgcacgaggaggacgagaagcgattc
cttgtcactgtcatcaaggacttgctggggttgtgcgagcagaagcgaggaaaggataat
aaagccatcattgcctcaaatattatgtacatcgtaggccagtacccacgattcctgcgc
gcacattggaagttcctcaagactgttgttaacaaactgtttgagttcatgcatgaaacc
catgacggtgtgcaggacatggcgtgtgacacgttcattaaaattgcacagaagtgcagg
aggcattttgtgcaggtgcaggttggcgaagtcatgcccttcattgatgagatactcaac
aatatcaacaccattatctgtgatttgcagccacagcaggtgcatacgttttatgaagca
gtgggttacatgattggcgctcagacggatcaggctgtacaagagcatctgatagagaag
tacatgctgctaccaaaccaggtgtgggacagcatcatccaacaagccactaagaatgtt
gatatcctgaaggacccagagactgtgaaacagcttggaagcatcttaaagaccaacgta
agggcatgcaaggcagtgggtcacccattcgtaattcagctaggacgcatctatctggat
atgcttaatgtctacaagtgcctcagtgagaacatctctgcagctatccagaccaatggt
gagatggtgaccaaacagcctctaatcaggagcatgcgcacggtaaagagagaaactctt
aaactcatctcaggctgggtcagtcgctccaatgacccacagatggtcggggagaacttt
gttccacctttgctggacgccgtcctgatagattaccaacggaacgttccggcagccagg
gagccggaagtgctcagcaccatggcgaccatcgtgaacaaactgggcggtcacatcaca
aacgagattccacagatctttgacgccgtgtttgaatgcacactgaacatgatcaacaaa
gattttgaggagtatccagagcaccgcacacatttcttctacctgctgcaggcggtgaat
tcccactgctttcccgcgttcctcgcaattcccccggcacagttcaaactggtactggac
tccatcatctgggcctttaagcacaccatgagaaacgtagccgacactggtctgcagatt
ctctacacgttgctccagaacgtggcccaggaggaggcagcagcacagagcttctaccag
acatacttctgcgacatactccaacacatcttctccgtagttacggacacatcacacaca
gccggtctcacgatgcatgcatccatcctggcttacatgtttaatttagtagaggagggt
aagataagtatgaccttgaaccctgcgagccctatgagcaatcaggctttcattcaggag
tacgtggccaacttgcttaagacggctttccctcatctgcaggatgcacaggtaaaggtg
tttgtgacggggttattcagtctaaaccaggacatccctgcatttaaagagcatttaaga
gacttcctggtacagattaaggagtttgcaggtgaggacactacagatttgtttcttgag
gaacgcgaggcatctttgcgccaggcccaggaggagaagcacaagctgcagatgtccgtc
cctggaatcctcaaccctcacgagatccctgaggagatgtgtgattga

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