Clarias gariepinus (North African catfish): 128535721
Help
Entry
128535721 CDS
T10780
Name
(RefSeq) cytosolic phospholipase A2 delta-like
KO
K16342
cytosolic phospholipase A2 [EC:
3.1.1.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00564
Glycerophospholipid metabolism
cgar00565
Ether lipid metabolism
cgar00590
Arachidonic acid metabolism
cgar00591
Linoleic acid metabolism
cgar00592
alpha-Linolenic acid metabolism
cgar01100
Metabolic pathways
cgar04010
MAPK signaling pathway
cgar04217
Necroptosis
cgar04270
Vascular smooth muscle contraction
cgar04370
VEGF signaling pathway
cgar04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128535721
00565 Ether lipid metabolism
128535721
00590 Arachidonic acid metabolism
128535721
00591 Linoleic acid metabolism
128535721
00592 alpha-Linolenic acid metabolism
128535721
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128535721
04370 VEGF signaling pathway
128535721
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128535721
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128535721
09153 Circulatory system
04270 Vascular smooth muscle contraction
128535721
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.4 phospholipase A2
128535721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLA2_B
C2
cPLA2_C2
rve
rve_3
Motif
Other DBs
NCBI-GeneID:
128535721
NCBI-ProteinID:
XP_053365741
LinkDB
All DBs
Position
13:4822105..4845348
Genome browser
AA seq
955 aa
AA seq
DB search
MARVLVDEVFSRFGTPEQLHSNQGRNFEAEVFAAVCERLGVQKTCTTPLHPQSDGLVERF
NRTLTTQLAVLASDQQKDWDEHLPLVLWAYLTTVQESSQLTPSALMFGRELRSPVDLVFE
PSPQSDLPTKPGRMVVLHRDRLAPYQLHVGETSNSVEAGPPQDNKEEAPYWNLSVTVLRG
RFRHSYDLFSLPDLYVTLRLPTASACTLRTRTIDNCKTPEWNETFFFRAYSQVKNILELN
LYDEDFVKDELCTSILLDISTLKLGQKEKKVFITDDKLKDELWVEFELTESAEAPDQYHS
NRVLVAVPFSTLEVKLDQLPKDIKHDMLLNVRGAYNERHVISMSSKNSNLMQTLRYYINK
NLETEIGLRMLKNERSSSPAVVPVSPFVATSEFTLSLPVAKDKVELHLTRVDSSEEDMKV
RLDFDIAAEEKVFLVKRKEVVSHALQKILNLQVPLDPTQVPTVAVVCSGGGSRAMTGTYG
SLKGLQSLGLLDVITYMTSVSGSTWTSASLYSDPFWSKEGLDKAIVSVQKELSKSPASLF
SPTHLHYYHSELQNREKEGYSVSFIDTWGLIIEQLVFGKKHTDTLSDQKKAVSEGQNPLP
IYTAVNMKKDPSGSTVPEWCEFTPFEVGFCKYGAFVPVENFGSEFYLGHVVKKLPETRVS
FLLGLWSSVFSTNLMHLWKTFTGVTPSCPEEKIDKIEEEEKCPALDTLRVDSEASSLSNF
MNDRPIISSVFNFIRGFFLHNSYTESPNFNISNDTNPDAFPNKLTPVDPTLSLVDSGFAI
NIGFPPVLRPQRSADLILSLSYSWDQDPLQVMKDTQQYCIDHQVPFPKIDFSKYRSQPKK
EVYVFMDEKNPDAPIVLHFPLVNVSFKDYKAPGVKRTGKKELKQGNIDVSSNFCPYVTSN
LTYSSEDFQRLVDLSHYNIVNNKDTIINALRKVLNKKGFVSSMTSADGTNNCKVN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagtgctggtggatgaggtttttagccgattcggcactccggagcagttacac
agcaatcaggggcgaaattttgaggcagaggtgtttgctgcagtgtgcgagcgcctcggg
gtgcaaaagacctgcaccacgccccttcatcctcaaagtgatggcctcgtggaacgtttt
aaccgaactctcaccacacaactcgcagtgcttgccagcgatcagcagaaggattgggac
gaacatttgcctctcgtgctctgggcatatctcacaacagtgcaggagtcatcacagctg
acgccatctgccttaatgttcggccgcgagctgcgcagtcccgtggaccttgtgttcgaa
ccttctccccaatcggatttacccacgaagcctgggcgaatggttgtgctccaccgagac
cgtcttgctccctaccagctgcacgttggcgaaacctcgaactctgtggaggccggaccg
cctcaggacaataaagaagaggcaccttattggaacctttctgtcacagttctacgagga
aggttccggcattcatatgacctcttttcactgcctgacctctatgtgacattacgccta
cccacggcctcagcttgcaccctgagaaccaggacaatcgataactgcaagacacctgag
tggaatgaaaccttcttcttccgtgcttatagccaggtcaagaatattctggagctgaat
ttgtatgacgaagactttgtaaaggatgaactatgcaccagtatcctgctcgacatcagc
accctcaaattgggtcagaaagagaaaaaagtcttcattacagatgataagctgaaggat
gagctatgggtggaatttgagctcacagagagtgctgaagcgcctgatcagtaccactct
aacagagttctagtggctgtcccgttttctactctggaggtgaagttggatcaacttcca
aaagacattaaacatgacatgctcttaaatgtacgaggagcatataatgaaaggcatgtg
atctcaatgtccagcaagaacagcaacctcatgcagactcttcgctactacatcaacaaa
aacctggagactgagattggactccggatgctgaaaaatgaaagaagttccagccctgca
gtagttcctgtaagcccttttgtagccaccagtgaatttacactctctcttcctgtggca
aaggacaaagtagaattgcatttaaccagagtggacagctctgaggaggacatgaaggtg
cgtctggattttgatatagctgcagaggagaaggtgtttctggtaaagaggaaagaggtg
gtctctcatgcactgcagaaaattcttaaccttcaggttccattggatcccactcaggtg
ccaacggtggctgtggtgtgttcaggaggcggctcgagggccatgacaggcacatacggc
tctctgaaaggactgcagagcctcggcctgctggatgtcatcacctacatgacctctgtg
tctggctccacctggacctctgccagtctctactctgacccattttggtcaaaagaaggc
ctggataaggctatagtgtctgtgcagaaggagctgtctaagagcccagctagcctcttc
tctccgacccatctgcattattatcactctgagctgcagaacagagaaaaagaaggctac
tcagtctcattcattgatacctggggtctcattatagaacagcttgtctttggaaagaaa
cacacagatacactgtctgaccaaaagaaggcagtgtctgagggccagaacccacttcca
atctacacagcagtaaacatgaagaaggatccaagtggctcaacagtccctgagtggtgt
gagtttaccccatttgaggtgggattctgcaaatatggagcctttgtccctgtggaaaat
tttgggagtgagttctacctaggtcatgtggttaagaagctgccagaaacacgcgtctcc
ttcctcctgggcctttggagcagtgttttctctactaatttgatgcacctctggaagact
tttactggagtgacaccatcctgtccagaagaaaagatcgacaagattgaggaagaagaa
aagtgtccagcacttgatactttacgggttgattcagaggcctcatcattaagcaacttc
atgaatgatcgccccatcatcagcagtgtgtttaacttcattagaggatttttcctccac
aactcgtatactgaaagcccaaatttcaacatctcaaatgacacaaaccccgatgccttt
ccaaacaagctgactccagtggacccaacccttagcttggtggattctggatttgccatt
aacataggcttccctcctgtgctgcgaccccagagaagtgctgatctcattctgtccctc
agctattcttgggatcaggacccattacaggtcatgaaagacactcagcaatactgcatt
gatcaccaggtaccattcccaaagatagatttcagcaagtatagatctcagccaaaaaag
gaagtgtatgtgtttatggatgagaaaaatcctgatgctcccatagtgctccactttccg
ctggtcaatgtctcatttaaggactacaaagcaccaggagtaaagagaacaggaaagaag
gagctaaaacagggaaatattgatgtgagctctaatttctgcccatatgtaacctcaaac
ctcacatactcttcagaagacttccaaagattggtggacctctctcactacaacattgtc
aacaacaaagacaccatcataaacgcactaaggaaagttttaaacaaaaaagggttcgtt
agtagtatgacctcagctgatggtacaaataactgcaaagtaaattaa
DBGET
integrated database retrieval system
