Clarias gariepinus (North African catfish): 128535774
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Entry
128535774 CDS
T10780
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00330
Arginine and proline metabolism
cgar00480
Glutathione metabolism
cgar01100
Metabolic pathways
cgar04148
Efferocytosis
Module
cgar_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
128535774
09106 Metabolism of other amino acids
00480 Glutathione metabolism
128535774
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128535774
Enzymes [BR:
cgar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
128535774
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
128535774
NCBI-ProteinID:
XP_053365798
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All DBs
Position
13:10969887..10996008
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AA seq
435 aa
AA seq
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MTMTLFDHFKFTFLDDGFCARDIVDQKINESTSSDDKDAFYVADLGDILKKHLRWARALP
RVTPFYAVKCNDSQTVLRTLETLGTGFDCASKTEIQLVQSLGVESSRIIYANPCKQVSQI
KYASAHGVQMMTFDSEVELMKVARSHDNAKLVLRIATDDSKAVCRLSVKFGATLKNSRLL
LERAKELGLDIIGVSFHVGSGCTDPETYTQAIADARCVFDMGAELGYNMTLLDIGGGFPG
TDKFKLTFEEITAVINPALDKYFPADFGVRIIAEPGRFYVASAYTLAVNIIAKKVNMKEQ
SGSDDKGNVTSDRTLMYYVNDGIYGSFQDVIRGYEHVTPIVHKKMKPDELMYPCTIWGHT
CNDLDRIVELCNLPEQQVGDWLLFENMGAYTVAASSTFNGFQKPDIHYVMSRSAWQCMQQ
IHGHCKCESTLEPPA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgactttgttcgaccactttaaatttacctttctggatgatggcttctgtgca
cgggatattgttgatcaaaaaatcaatgagtccacttcatcggatgacaaggatgctttc
tatgtggcagacctgggggatatccttaagaagcatcttagatgggcacgtgccttgcct
cgtgtcacacctttctatgctgtgaaatgcaatgatagccagactgttctaaggacactg
gaaactctgggaacaggctttgactgtgcaagcaagactgagattcagcttgtgcagtct
ctgggagtggagtccagcaggatcatttatgccaacccctgtaagcaggtgtcgcagatc
aagtatgcttctgcacatggagtgcaaatgatgacatttgacagtgaagtggaactaatg
aaggttgctcggagccatgacaatgccaagctagtgctgcgtatagctacagatgactct
aaggcagtgtgcaggctaagtgtgaagtttggagccacgctgaaaaatagcaggctgctt
ttagagcgggcaaaggagctgggcctggacatcattggagtcagctttcatgtaggcagt
ggctgtactgacccagagacatacacccaggctattgcagatgcacgctgcgtctttgac
atgggggctgagttgggctacaatatgactctattggatattggtggtggcttccctggc
actgataaattcaagctaacatttgaggagattactgctgtgattaaccctgcgctggac
aagtactttcctgcagacttcggtgtgaggataattgctgagcctgggcgattctatgta
gcttctgcatatacgctagctgtgaacatcattgctaaaaaagtcaacatgaaggaacag
tctggctctgatgataaaggcaatgtgaccagtgacagaactctaatgtactatgtcaac
gatggcatttatggatcttttcaagatgtaattcggggatatgaacatgtgacacccatt
gtgcacaagaaaatgaagcctgatgagctcatgtacccatgcactatttggggtcatact
tgtaatgacctagaccgcattgtggaactgtgtaacctgcctgagcagcaggtaggagat
tggctgctgtttgaaaacatgggtgcttacactgtggctgcctcatcaacctttaatggc
ttccaaaaaccagacatccattatgtcatgtctagatcagcttggcaatgcatgcagcag
atccatggccactgtaaatgtgaaagcaccctggagccgcctgcttag
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