Clarias gariepinus (North African catfish): 128535793
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Entry
128535793 CDS
T10780
Symbol
sptlc2a
Name
(RefSeq) serine palmitoyltransferase 2
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00600
Sphingolipid metabolism
cgar01100
Metabolic pathways
cgar04382
Cornified envelope formation
Module
cgar_M00094
Ceramide biosynthesis
cgar_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
128535793 (sptlc2a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128535793 (sptlc2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgar01007
]
128535793 (sptlc2a)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
128535793 (sptlc2a)
Amino acid related enzymes [BR:
cgar01007
]
Aminotransferase (transaminase)
Class II
128535793 (sptlc2a)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Endonuc-BglII
Motif
Other DBs
NCBI-GeneID:
128535793
NCBI-ProteinID:
XP_053365826
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Position
13:29048000..29073417
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AA seq
572 aa
AA seq
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MTESAVNKEANGDVCQQQHRAVNGGVKPGSSSRNGALKDQQHCHQRAFYKRDEKVYPSEC
NGGLYSKPFIESFEETPMMVAVLTYMSYGILTIFGYLRDFLRQWKIEKCHIARDKEEQRD
FVPLYQDFENFYTRNLYMRIRDNWNRPICSVPADKMDLVERVSHDYNWTFNYTGRVVKDV
INMGSYNYLGFAENKGPCADAAAEATLKHGVGVCSTRQEKGNLDRHEELEKLVARFLGVE
SAMAFGMGFATNSMNIPALTGKGCLILSDELNHASLVLGARLSGSTIRVFKHNNMQSLEK
LLRDAIVHGQPRTHRPWKKILILVEGIYSMEGSIVRLPEIIALKKKYKAYLYLDEAHSIG
ALGPRGRGVVDYFNLDPTDVDILMGTFTKSFGAAGGYIGGRKDLINYLRSHSHSAVYATS
MSPPVVEQIITSMKCIMGEDGTTIGRDRIQRLAENTNYFRRRLREIGFIIYGNNDSPVVP
MMLYLPAKIGAFGRQMLKRNIGVVVVGFPATPIIESRARFCISAAHTKEMLDTALNAISE
VGDLLQVKYSRHKILPSLDRSYDETTYEECED
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagagcgcggtgaacaaggaggcgaacggcgacgtgtgtcagcagcagcaccgg
gcggtgaacggcggcgtgaaaccgggcagcagcagcaggaacggcgccctgaaggaccag
cagcactgtcaccagagggctttctacaaacgagacgagaaggtttaccccagcgagtgt
aatggaggcttatacagcaaaccgttcatcgagtcgtttgaagagaccccgatgatggtg
gctgtgctgacgtacatgagctatggaatcctcaccattttcggctacctgagagacttc
ctccgccaatggaagatcgaaaaatgtcacatcgctcgagacaaagaggaacaaagggat
tttgtcccgctttatcaagactttgagaatttctacacccgaaatttatacatgaggatc
cgggacaactggaacaggcccatatgcagtgtgcctgcggacaagatggacctggtggag
cgagtgtcgcatgactacaactggaccttcaactacacaggccgagtggtgaaagacgtg
atcaacatgggctcatataattacctgggcttcgccgagaacaagggcccgtgcgccgat
gcggcagcagaagccactctgaaacacggcgtcggcgtgtgcagcaccagacaggagaag
ggtaacctggacagacatgaggagctggagaagctggtagcgaggttcctaggtgtggag
tcggccatggcgttcgggatgggtttcgcaactaattccatgaacattccagcactgact
ggaaagggatgtctgatcctgagcgacgaactgaaccacgcctctctcgtcctgggagcg
cgcttatctggctccaccatccgggttttcaagcacaacaacatgcagagcctggagaag
ctgctcagagacgctatagtgcacggccagcccagaacccaccggccctggaagaagatc
ctcattctggtcgagggcatctacagcatggaaggctccattgtgcgcctgcctgaaatc
atcgccctgaagaagaagtataaagcctacctctacctggacgaggctcacagcatcggc
gctctgggtccccggggtcggggtgtggtcgactacttcaacctcgaccccacagacgtg
gacatcttgatgggaacgttcaccaagagcttcggggcagctgggggttacatcggcggg
agaaaggatctgatcaattacctgcgctctcattctcacagcgcagtgtatgccacctct
atgtcgcctcccgttgtagagcaaattatcacttctatgaagtgcattatgggagaggat
ggaaccacgataggcagggatcgcatccagaggctggcggagaacacaaactacttccgg
aggaggctgagggagataggcttcatcatctacggcaacaacgattcacctgtagttccc
atgatgctctacttgcccgccaaaatcggggcgttcggtcggcagatgctgaagaggaac
ataggtgtggttgtcgtgggtttcccagccacgcccatcatcgagtccagagcacgcttc
tgcatctctgcggctcacaccaaagaaatgctggacacggccctgaacgcgatcagcgag
gtgggagatctgctgcaggtgaaatactcgcgccacaagatcctcccgtctctcgaccgg
tcctatgatgagaccacttacgaggagtgcgaagactga
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