KEGG   Clarias gariepinus (North African catfish): 128535824
Entry
128535824         CDS       T10780                                 
Symbol
bicc1a
Name
(RefSeq) protein bicaudal C homolog 1
  KO
K18756  protein bicaudal C
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgar03019]
    128535824 (bicc1a)
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128535824 (bicc1a)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 KH_GLD-3_1st KH_Vigilin SAM_1 SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_NusA_2nd SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 128535824
NCBI-ProteinID: XP_053365863
LinkDB
Position
13:6452376..6511403
AA seq 993 aa
MAAQRVPLSGCSQHSDPGSNSERSADSPLPASESDSSGHVSPPNPDWTEERFRVDRKRLE
TLLLAASEGRVIGGEDFFQKIMDETSTQIAWPSKLKIGAKSKKDPHIKVSGRRDDVREAK
ERILAVLDTKSKRVTLKMDVSHTEHSHVIGKGGNNIKRVMEETGCHIHFPDSNRNSQGEK
SNQVSIAGQPAGVETARAKIRELMSLVLMFECGRFVESVDLSSPVIQHIAQSCGVAITCK
PPSHIYGNTVAIRGNQSNGAAVKRGAALLLDHLAGSMSGSITVSTQLDIAPQHHLSLLGR
NAANLKHISQRTGAHIHFPDPSTPSHSHAHTRRSSVYIQGSVDAVCDARQQLMGCLPLVL
MFDIKEEAEIEPQCIATLMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARRLLLA
LESACASSPSTPVSSSAFPLSTNTLPVNDHGSPPSLLTPVGLDALASAGLGLSTLGLLSS
PDLPAHNGSPDSNPVLNGHGSIQNGPNDVVGTLQSSNHTHTLAPLQGASLWTNTHTTSAN
TAGFSPVLMLQSVSQGSLSGLLLSGVHGYGQNYTQSPSLTHSHTHTHTPSPPPGLAPIHK
PVSTDQLKTHMPSMYRGISSVSLTESMLGPAHCDPAQEVNGHSQSEALSNKSSPDEGSDT
FVEVGMPRSPSHSANGSELKQMLASCAVSPGKRQTVELLQGTKNSHLRSDCLLSDPEPDT
VADKRAPGSERAAERNRLVPHVQSFDYEQKKLLATKAMLKKPVVTEVRTPTDTWSGLGFS
KSMPAESIKHLRRAGHTAYKPSVNTTCQGTPLSVSCTGSRDSQSNDSDGESWCTRNGSCV
INGSGAGTRAFPSTISATERSKRTAMDQYLSSSNYMECISFMGGSKASSLSSKGTDLPEL
FSTLGLGKYTDVFQQQEIDLQTFVTLTDPDLKELGITTFGARRKMLLAISELNKSRRELF
EPSNVRTSFLEGGVNSRLARHFHADVASVSGRW
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggccgcgcagcgcgtccctctgagcggctgctctcagcactctgacccgggctcgaac
agcgagcggagcgctgactccccgctgcccgcctcggagagcgactcgagcggccacgtg
tccccgcccaacccggactggaccgaggagaggttccgtgtggacagaaagagactagaa
accctgttattagcagccagtgaagggagagtaattggaggtgaagattttttccaaaag
atcatggatgaaacgagcactcagattgcttggccttccaaactaaagataggagctaaa
tccaaaaaagaccctcacattaaggtcagtggaaggagagatgatgtaagagaagcgaaa
gaaaggatcctggctgttctggacacaaagagtaaacgcgtgacactgaagatggatgtg
tcgcacacggagcactcgcacgtaatcgggaaggggggcaacaacatcaaacgcgtgatg
gaggagacgggctgccacatccacttccccgactcgaacaggaacagccagggggagaag
agcaatcaagtgtctatagcagggcagccagcaggagtggaaaccgcgagggctaaaatc
cgggagctgatgtcattggttttgatgtttgagtgcgggaggtttgtcgagtctgttgac
ctctcctctccagtcatccagcacatcgctcagtcgtgcggcgtcgccatcacgtgcaag
ccgccctcccatatctacggcaacactgtcgccatccgtggaaatcaaagcaacggcgca
gcagtcaagcgtggagcggctctgctgttggatcacctggctggctccatgtccggctct
ataacggtcagcactcagctggatatcgcacctcagcaccacctgagcctcctgggcaga
aacgccgccaacctcaagcacatcagccagcgcaccggcgctcacatccacttccccgac
cccagcacgccctcacactctcacgctcacacacgccgctccagcgtctacattcagggc
agcgtcgacgccgtgtgtgacgccaggcagcagctcatgggctgcttgccgttggtttta
atgttcgacattaaggaggaggcggagatcgagccccagtgcatcgcaactcttatggag
caactagacgtcttcatcagcattaaacccaaacccaaacaacccagcaagtctgtgatt
gtaaagagcgtggagagaaacgcggtaaacatgtacgaggcccgcagactgctcctggct
ctggagagcgcttgcgcgtcttctcccagtactcctgtttcttcttctgcttttcctctc
agtaccaacaccctccccgttaacgaccacggctcccccccatccctcctcacccctgtc
ggactggacgccttggcctcagctggactggggctaagcactctgggtctcctaagttcc
ccagatcttccagctcataacggttcgcctgattctaacccggttctgaacggtcatggt
tctatccaaaatggtcctaacgatgtagtcgggacactgcagagcagcaaccatacacac
accctcgctccgttacaaggggcttccctctggaccaacactcacactacatcagccaac
actgcaggattctccccggtcctgatgttgcagtctgtctctcagggttctctcagcggt
ctgctgctgtccggagtccacggttacggccagaattacacacagagtccctctctcaca
cactcgcacactcacacgcacactccttcgccgccaccgggactggcgccaatacacaaa
ccagtgagcactgatcaactcaaaacacacatgccttctatgtacagagggatttcatcc
gtgtcactaactgaatccatgcttggccccgcccactgcgacccagcacaggaagttaac
gggcacagccaatcagaagctctatcaaacaaatccagccctgatgaaggctcagacacg
ttcgttgaagtgggcatgcccagaagcccatcccactcagccaatgggagcgagctaaag
cagatgctggcttcctgtgctgtgtcaccagggaaacggcagactgtagaactgctccaa
ggcaccaagaattcacatctccgatcagattgtctgttgtcggatcctgagcctgatacc
gtagctgataagagagcaccaggcagtgagagagcagcagagaggaacagactggtccct
catgtacaatcctttgactatgaacagaagaagctactcgccactaaagccatgctgaag
aagccagtggtcacagaggttcgaaccccgaccgacacatggagcgggctcggcttctcc
aagtccatgcctgcagagagcatcaagcatctccgcagagccggccatacagcctacaaa
ccctctgtaaacactacgtgtcagggcactcctctctcagtatcatgcacaggcagcaga
gactctcagagtaacgacagcgatggtgagagctggtgcaccagaaacggaagttgtgtt
attaacggtagtggagcaggaacacgcgcgttcccgtccaccatcagcgctacagagagg
agcaagagaaccgctatggatcagtacctgagcagcagtaactatatggagtgtatctcg
ttcatgggtggcagtaaggcgtcgtctctgagctctaagggtacggacctacccgagctc
ttcagcactctgggactgggcaaatacaccgacgtcttccagcagcaggagatcgatctg
caaacgtttgtcacactgacggatccagacctgaaggaactgggaataacaacgtttgga
gctcgtaggaagatgctgctggctatctcagagctgaataaaagccggcgggagctcttc
gaaccttcgaacgtccgcacctcgttcctggagggcggagtcaacagccgtctcgcacgg
cacttccatgccgacgtggccagcgtgagtgggcgctggtga

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