Clarias gariepinus (North African catfish): 128535832
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Entry
128535832 CDS
T10780
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03272
Virion - Hepatitis viruses
cgar04382
Cornified envelope formation
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128535832
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128535832
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128535832
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128535832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128535832
04147 Exosome [BR:
cgar04147
]
128535832
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128535832
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
128535832
Exosomal proteins of colorectal cancer cells
128535832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
DUF4131
Motif
Other DBs
NCBI-GeneID:
128535832
NCBI-ProteinID:
XP_053365873
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All DBs
Position
13:27020615..27029666
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AA seq
242 aa
AA seq
DB search
MASTGTQIFGFVLALLGILGIMVATLLPNWKVSADVGSSIITVISQMQGLWMDCTWYSTG
MFSCTLKYSVLALPAYLQTARTTMVLSCVLAALGLCLASLGLKCTHWGGGRRAKRHAALG
AGACFVASGFLCLVPASWYTNEVISSFLDANVPESNKFEPGGAIYVAFVSSGLLLASGFI
FCLSCPGKRHGPQDLVLLPPDKLLLQQQQQLLQQQHLDQLQHQYCTLSPLDNKTGYSLQD
YV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacaggcacgcagatcttcggctttgtgctggccttgctgggcatcctgggc
atcatggtggcaacgctgcttcctaactggaaggtgagcgcagacgtgggctcgagcatc
atcaccgtcatctcacagatgcagggcctgtggatggactgcacctggtacagcacggga
atgttcagctgcacgctcaagtactccgtactggcacttcctgcatacctgcagacggca
cgcactaccatggtgctgtcctgcgtcctggctgcgctcgggctctgcctggcgtcgctc
ggacttaagtgcacgcactggggtggcggtaggagagcaaaacgtcacgctgcactgggg
gctggagcctgcttcgtagcctctgggttcttgtgtctggtgcctgcgtcttggtacacc
aacgaggtcatctccagctttttggatgccaatgtacctgagagcaacaagtttgaaccg
ggcggtgcgatctatgtcgcgttcgtgtcgtctggtttgcttttggcaagcggtttcatc
ttctgcctgtcgtgtccaggcaagcgacatggacctcaggatctcgtcctgctgcctccg
gataaactcttactccagcagcagcagcagctcctccagcagcagcatttagaccagctc
cagcaccagtactgcactctctcacctctggataataagacgggttacagtctgcaggac
tacgtgtaa
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integrated database retrieval system
