Clarias gariepinus (North African catfish): 128536017
Help
Entry
128536017 CDS
T10780
Symbol
pcare1
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128536017 (pcare1)
04812 Cytoskeleton proteins [BR:
cgar04812
]
128536017 (pcare1)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128536017 (pcare1)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
128536017 (pcare1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
DUF6471
Motif
Other DBs
NCBI-GeneID:
128536017
NCBI-ProteinID:
XP_053366131
LinkDB
All DBs
Position
13:complement(2383643..2387961)
Genome browser
AA seq
1106 aa
AA seq
DB search
MGCTPSRGNNLNGAQGPFSKGTTLLPETKRNLEDRQSDNGGSVSPGAAGGAGEISREKTL
DINTISVPLVKKHPTVEPEAATITSEKENEKKYEKRGARKTKNHKNAKSSIKKDKERIPA
TEKKVDFPEELVNAHQAAYGYLNPSIDKYELLLGLLDHAAQTHISLQPMAAFMALRYQEF
NQGLEEIVKEGETLLKDHGGHLAWPRNTKNVPSRGKPIPTKPPPDLLQQLLQYTVQRMCL
LGRSVKGIGDTALEDAVDYFSSVSEILQEKLNAKRAVEARLMQLLTRIEVASLQRPGPED
SALFSEDSGIGVESESMAGSDRQRQRRESCESSESSRTVIYSPENSTPVHQGSSYQTFSC
SSSATSINSFCTFTGKVFGDTESLLSCTLLDDGNGEVEEDSKEGKKERYCEGKVRLHSSS
ALPDSGHQTQCIPTKRIENPNNVEMTIKMKDAISEKINFVSSQHSGEKIKHGILKTSDQQ
WTDEGDKRRQRPQTAMNQSPNKKAAVTKQRRSRSADSLGSKMDDPTLLELERTQKELSKR
MEKMGTVRTGQNINKEISKQKKQKAQTHPLRLTSSNSNRKALGEKIVAEKNQSEERGKKK
IYKTTNGPMKETSLPSPPPSPQQLCHRGNSVKKLIDSFSQGMQESKRFHERSKGLGPLKG
VRKYGIPVIPGLGSEDKFLCIKNDSMDNQKECISLENQDDIDLDNLPPPPLEVLMDNSFE
NVEMSKTHEKLNSRGRSTLPKTTSMSQRLRTAMQSVTVLPSKGSMRKGSHSLSPARSITL
HPSGVAKHSQVAPTSNVGLRNEEAVSLYKQARKIIHLRYSSNSPTEKPAVNNENLLLTQS
SIERNQMDKKTPETRASSSTAGENSENQSLDASTVSRTHMLSSTPAHRRLPSPPVFKRTP
ISSNSSGTLISRKLPTPPLASQCTQTNTPTNQDPRPSCISGVSYPFKAPSPPASPKVQRR
SRDNNSEHCVSRVFSNAHSVFCPASPSLFEAQPNRVPKPPQAWTPSGRSILPRPWGEHAR
SSTAVQGPKPFVRRSQSDRRPSLSLPPRAPVVSIAQSCGSEPAINTQGLEDAPIRDTWNK
RLEIREANRSSSHPDLCIVGQALQSE
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaccccatcaaggggaaataacctaaatggagcacaaggaccattcagcaaa
gggacaacattgctgccagagactaaaagaaacttggaggatagacaatctgataatgga
ggaagtgtaagccctggtgctgctggtggtgctggtgagataagtagagaaaaaacactg
gacatcaatacaatttctgttcctttagtcaagaaacaccctacagttgaacctgaagca
gcaacgattacttcagaaaaggaaaatgaaaagaaatatgagaaacggggtgcaaggaaa
acaaagaatcataaaaatgccaaatcaagcataaagaaagataaggagagaatacctgcg
actgagaagaaggtggactttccagaggaacttgtaaatgcccatcaagcagcatatgga
tatcttaatcccagtatcgataaatatgaactgctattgggcttattagatcatgcagca
caaactcacatttctttgcaacccatggctgcgttcatggctctccgctaccaagagttc
aaccaaggtctagaagaaattgttaaagaaggagagacacttttaaaagaccatggggga
catttggcttggccacgcaataccaaaaatgtaccttctcgcggcaaacccattcccacc
aaacccccaccagacttacttcagcagctacttcagtatacggtccaaaggatgtgtctt
ttgggacgatcagtgaaaggaattggggacacagcccttgaggatgcagtggattatttt
tcatctgtctctgaaatcctacaggaaaaactgaatgcaaaacgtgccgttgaggctagg
ctaatgcagctgctaactagaattgaagttgcctcgttacaaagacctggaccagaggac
tcagcattgtttagtgaagacagtggtattggtgtagaaagtgagtcaatggctggatca
gacagacaacgccagcgcagagaaagctgtgaatcaagtgaatccagtcgtacagtaatt
tacagtccagaaaactctacccctgtccatcaaggctcttcttatcaaacatttagctgc
agcagctctgcaacctctattaattccttttgtacatttacaggtaaggtattcggagat
acagaatctttgctttcttgcacattattggatgatggtaatggagaagtagaagaagac
agcaaggagggcaaaaaggaaagatattgtgagggtaaagtaaggttgcattcaagctct
gctcttcctgactctggccatcaaacacaatgcataccaacaaaacgcatagaaaatcca
aacaatgtagaaatgaccataaaaatgaaagatgccattagtgaaaagattaattttgtt
tcatctcagcactctggagaaaagataaaacatggaatcttaaagactagtgaccagcag
tggacagatgagggggacaaaaggcgtcaaagaccacaaacagctatgaatcaatcacct
aataagaaagcggcagttactaaacagcggcgttcgagatcggcagattctcttggtagt
aaaatggatgaccccactcttcttgaactggaaaggacacaaaaagaattgagtaaaagg
atggaaaaaatgggaacggtcagaacaggacaaaatataaataaagaaatttctaaacaa
aaaaagcaaaaagctcaaacacatcctttacgtttaacttcatcaaacagtaataggaag
gcacttggtgaaaagatcgttgcagaaaagaatcagtcggaagaaagggggaaaaagaaa
atctataaaactaccaacggacccatgaaggaaacctcccttccaagtccaccaccatca
ccccaacaactgtgccacagaggaaattctgtcaagaaactgattgacagcttcagtcag
ggaatgcaggaaagcaaacggtttcatgaaaggtcaaaagggcttggacctcttaaagga
gttaggaagtacgggattccagtcattccaggtttgggaagtgaagataaatttttatgc
attaaaaatgacagcatggacaatcaaaaggaatgtatatccttggaaaaccaagatgat
attgatttggacaacctaccaccacctcctctggaggtcctcatggataattcttttgaa
aatgtagaaatgagcaaaacacatgaaaaattgaacagtaggggacggtctaccctgcca
aagacaaccagcatgtctcaaaggctccgcactgccatgcaatctgttacagttctacct
agcaagggaagtatgagaaaaggttctcacagcttatcgcctgcacggagtattaccctg
caccccagtggggtggctaagcacagccaagttgctccgacatctaatgtaggtttaagg
aatgaggaagctgtctcactttataaacaggctcgaaaaattatccacttgcggtactca
tccaattctccaacagagaaacctgctgtgaataatgaaaacttactactcactcaaagc
agtattgaaagaaatcagatggacaaaaagacccctgaaacaagggcgtccagttcaaca
gctggagaaaatagtgaaaatcagtcacttgacgcttcaactgtatccaggacccacatg
ttatcttctacacctgcacacaggaggctgcccagtccacctgtatttaaaagaacacca
atttcttccaactcatctggtacattaatatctcgcaaacttcccactccaccactagcc
agccaatgtacacaaactaatacccccactaatcaagaccccaggccgagctgcatttct
ggagtttcctatccttttaaggcaccatctccccctgcctccccgaaagtgcaaagacgg
tctagggataacaacagtgagcactgtgtttcaagagtattcagcaacgctcactcagtt
ttttgtccagcctcaccatctttatttgaggcacaaccaaaccgtgtgcctaaacctcca
caggcatggaccccgtctggacgtagcatactacctcggccctggggtgagcatgctcgg
tcatctacggctgtccaaggaccaaagccttttgttcggcgtagtcagtctgacagaaga
cctagtctcagtcttccacctagggcaccagtggtgtctattgcacagtcttgcggaagt
gaaccagcaatcaacactcaagggctggaagatgctccaatcagagatacctggaacaag
cgtctggagatcagagaagcaaatcgttcttcctcccacccagacctgtgcattgtgggt
caggccttacagagtgaataa
DBGET
integrated database retrieval system
