Clarias gariepinus (North African catfish): 128536041
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Entry
128536041 CDS
T10780
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2 isoform X1
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03030
DNA replication
cgar03410
Base excision repair
cgar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128536041 (pole2)
03410 Base excision repair
128536041 (pole2)
03420 Nucleotide excision repair
128536041 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128536041 (pole2)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128536041 (pole2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128536041 (pole2)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
128536041 (pole2)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
128536041 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
128536041
NCBI-ProteinID:
XP_053366159
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All DBs
Position
13:complement(25686885..25699956)
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AA seq
529 aa
AA seq
DB search
MKMDSRRLKTKISAGFKMRGLMLRPEASKYLVEVLESVSEVELEDVIERILDGIEKQPLS
SNMIELSVAETAVQDCSQSCDETIDNVFNIIGAFDVPRFMYSTERKKFIPISMTNHPVPS
VCGQARDKAELFRERYTILQQRIHRHELFTAPLIGVAADEARNKFQLKTVEALLGNTAKL
GEVIVLGMITQLKEGKFFLEDLTGSVQLNLSKAQFHSGLYTESGFVLAEGWYEDSIFHVS
AFGFPPIEPSSTTRSYYGNVNFFGGPSTTSVKASAKLKQLEEENEDAMFVIISDLWLDSV
EVLDKLQTMFSGYSAMPPTCFIFCGNFSSAPYGTNQIKSLKDSLKALADLICEHPNIHNS
SRFVFIPGPEDPGPRSILPRPPLAEHITEEFRQRIPFSVFTTNPCRIQYCSQEMVVIRED
LVNKMCRNCLTIPSTSLDIPNHFVKTILSQGHLTPLPLYVSPVYWAYDYALRVYPVPDII
VFADKYDPFSISSSDCLCLNPGSFPKSGFSFKVYYPSSRTVEDSKLQGL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggattcacggagactaaaaacaaaaatatcagctggcttcaagatgcgaggc
ttaatgctgagacctgaagccagcaaatatctggtggaagtgttggagtctgtgagtgaa
gtagaactggaggatgtcattgagcggatcctggatggaattgagaaacagcccttgtct
tctaacatgattgagctctctgtagctgagactgctgtgcaggactgcagtcagtcatgt
gatgaaactatagacaacgtgtttaacatcattggagcttttgatgtacctagattcatg
tacagtaccgaaagaaagaaattcatcccaataagcatgaccaaccatccagtccctagt
gtgtgtggccaagctagagacaaggctgagctctttcgagaacgctataccatcctacag
cagaggatacacagacatgaactctttactgcaccattgattggcgttgctgcagatgaa
gctagaaataagttccagttaaagactgtggaggctcttttaggaaacactgcaaaactg
ggtgaagttattgtccttggcatgatcacacagcttaaagagggaaagttttttcttgaa
gacctgactggctctgtgcagttgaacctttccaaggcacagttccacagtgggctgtac
accgaatctggctttgtgttggctgaaggttggtatgaagactcaatttttcatgtcagt
gcctttggttttccaccaattgaaccctcctctactaccaggtcatattatggtaatgtg
aatttctttggtggtccatccacaacctcagtaaaagcatctgccaagcttaagcagctt
gaagaagagaatgaagatgccatgtttgttatcatttctgacttgtggctggacagtgtt
gaggtgctggataagctccagaccatgttttcaggttattcagcaatgcctcccacatgc
ttcatcttctgtgggaacttctcctctgctccatatggcacaaatcagatcaagtcactt
aaagactctttgaaagctcttgctgatttaatttgtgaacatcccaacatccacaacagc
agtcgctttgtatttattcctggccctgaggaccctggaccccgaagcatcttgcccagg
cctcccttagctgaacatattactgaggaatttagacaacgaatccctttctctgtcttc
accacaaacccatgcaggatacagtactgtagtcaggagatggtggtgatccgagaagac
ttggtcaacaagatgtgtaggaactgcttgacgatccccagtaccagcctcgacatccca
aaccattttgtgaagactattttgtctcaaggccatttgaccccacttcccctatacgtc
agtccagtgtactgggcatatgactatgccttacgtgtctaccctgttcctgacattatt
gtctttgctgataaatatgacccctttagtatctccagctcagattgcctctgcctcaac
ccgggttcttttccaaaaagtggattttcttttaaagtgtactatccatccagcagaaca
gtggaggacagcaaattgcaaggactttga
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