Clarias gariepinus (North African catfish): 128536119
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Entry
128536119 CDS
T10780
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128536119 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128536119 (wdr43)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128536119 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
Utp12
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_EML
EIF3I
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_RSE1_2nd
Beta-prop_SCAP
Paf1
Beta-prop_WDR75_2nd
WD40_2
Tricorn_2nd
Beta-prop_RIG_1st
DDHD
UTP15_C
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
128536119
NCBI-ProteinID:
XP_053366256
LinkDB
All DBs
Position
13:8019832..8033997
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AA seq
672 aa
AA seq
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MAADGGCALSSPSAPTLPCTFSPTSLHYLAVCAQDGRLRIWNADSRALHREYVPSAHLSA
TCTCIAWGPCRATKEGPQRKKRKSEAGPASAQQSDLLALGTAAGTVLIYSTVKGDLHCTL
DGGHSGSVNSVQWHPNESVLYSGSDDTHIAEWDLKTGKTRCKWKADRAAVTSLCVSPDGK
LLLSAGMTIKMWDLETKEVYRRFTGHSTTVTTLCFATTRPPDSNGLYFLSGAAHDRLLSV
WQVRSDGKDKNSVVSFTLTDEPQHIDLQTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCK
KPLSPVCSVQMSSAGSGEGAIPMPVPLLSAALSSDKQSIMLAYGNHLQPVIEKTSINTSE
RHVCLIRDVQTTLSLSVDAAITKVKTPIVNEKKSKVLIPGVPGHQAPIKAAPSQSEKRKK
GAVSTEMSIEERLEQIELSASGGKGEGKGVSASLQTDGFAVLLVQGLESKDEKILNKIFQ
TKKEALIRNTVARLPPPAVLPLVEELSRRLQGHPFSAILIVQWLKAVLTHHTSYLSTLPD
LVSQLGALYHMIESRVKLYQQLTRLHGKLYLLMTQVATSTSSHKVGDLDHKAKLVYEEES
SDEDEDSGDEGRPGDDSDQNWEEDEEQDNEEGMDITEDKENHAADEDESEEEEKDKSKAN
GDSDLDAESEEE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacggaggctgtgctctttcttcaccctcggcgccgacgctgccgtgcacc
ttctcgccgacgtcgctgcactacctcgcggtgtgcgcgcaggacggtcgtctacggatc
tggaacgccgactcgcgcgcgctgcaccgggaatacgtgccttccgcgcaccttagcgcc
acttgtacgtgcatcgcctggggaccatgccgagcgaccaaggaggggcctcagaggaag
aagaggaagtcggaggcaggtccggcgtcagctcagcagtcggatctgttggctctgggt
acagcagcgggcaccgtcctcatctacagcacagtgaagggagatctgcactgcactctg
gacggagggcatagtgggagtgtgaacagcgtccagtggcaccctaatgaatctgttctc
tacagcggctcagacgacacacacattgcagagtgggacctgaagacgggcaaaacacgc
tgcaaatggaaagcagacagggcagcagtgacgagtttgtgtgtgagtcctgatggcaaa
ctcctgctgtctgctggaatgaccatcaagatgtgggacctggagaccaaagaggtgtac
aggaggttcacaggtcactcaacaacagtcacgaccttgtgcttcgcaacaacccgacct
ccggacagcaacggcctgtacttcctgtctggagctgcccacgacagactgctcagcgtg
tggcaggtgcgatccgatggcaaagacaagaactctgtggtatcattcacgctgacggac
gaaccgcagcacatcgacctgcaaacgtccaacagcaaagaagaggcggtgcggttagca
gtggtgtgtaaggatgggcagctgcatctcttcgagcactttctcaacgggccgtgtaag
aaacccctgtccccggtgtgctcagtgcagatgtcgagcgctggttctggtgaaggtgct
atcccaatgcccgtccccctgctgtctgcagctctgagttcagacaaacagagcatcatg
ctcgcatacgggaatcacctacagcccgtcatcgagaaaacctccatcaacacatcagag
aggcacgtgtgtctgatccgagacgtgcagacgacgctgtcgctgtcagtcgatgctgct
atcacaaaagtgaagacccccattgtgaacgaaaagaagagcaaagttttaataccggga
gtccctggacatcaagcacccatcaaagctgctcccagccaatcagagaagaggaagaaa
ggagcagtttctacagagatgtcgatagaggagcggttggagcagatcgagctgagcgca
tcaggtggtaaaggagagggtaaaggagtttcggcttcgctccagactgatggctttgcc
gttctgctcgttcaggggctcgagagcaaagacgagaagatcctgaacaaaatctttcaa
acaaagaaggaagccctgattaggaacacggttgcacggttgcctcctccagctgtcctg
cctctcgtggaggagctgtcgagaaggcttcaaggacatccattctcggcgattcttatc
gtgcagtggctaaaggccgtgttgacgcatcacacctcatacttgtcaacgcttccagac
ctggtgtctcagttgggggcactctaccacatgattgagagccgagtgaagctgtaccag
cagctgacgagactccacggcaagctctacctgctcatgacgcaggtggcgacaagcacc
agttcccacaaagtaggagacctggaccacaaagcgaaactggtgtatgaggaagagtcc
tcagatgaagatgaagactccggagacgagggacggcctggggacgactcggatcagaac
tgggaggaggatgaggagcaggacaatgaggaaggaatggacataacggaggacaaagaa
aaccatgcagctgatgaggacgagagcgaagaagaagaaaaggacaagtccaaagcaaac
ggcgattcggacttagacgctgagagcgaagaggaatga
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