Clarias gariepinus (North African catfish): 128536124
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Entry
128536124 CDS
T10780
Symbol
lrr1
Name
(RefSeq) leucine-rich repeat protein 1 isoform X1
KO
K10348
LRR-repeat protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128536124 (lrr1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
128536124 (lrr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
NoBody
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
128536124
NCBI-ProteinID:
XP_053366261
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All DBs
Position
13:complement(25724453..25729542)
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AA seq
428 aa
AA seq
DB search
MLDAMYFLFCCWHLILYFFHAISQVHIAKLFSLPLSIFIMLNSEWSERVYFIYKILLTLC
PCCFLHIKLKENIERFFTCFVEEGKATVRLKEPMVDICMSKADTASLKTFLSAAQLAHRG
NCRDSFALSTLTPVRARDVEKPKKKLTIMSKKDYPLTSSFPYSLEQLQVSYCKLSRVDMR
MLCLKSLRTLDLSNNHIKKLPDTIGDLRFLTELILNNNRLESFSEALCLSSLQKSLQRLD
LSQNCIKLLPACFCKLCELVTLKMDDNELVRLPFHIGRLTKMRFLSAAHNKLTVLPGDFR
KLSLENLDLFGNPFVQPNPFDHSIQLTLPLSLEELASRAVLNYRIPYGPHLIPFHLCGKM
ELAKVCNCGCSCVSSHIQTAVSMNLHQVSHTVVLVDNMGGTEAPIQCHFCSLTCYCQFLD
GCAQRGLS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgctatgtattttttgttttgctgttggcacctcatactgtacttcttccat
gctatcagtcaggtgcacatagcaaaattgttcagtcttccgttatcaatattcataatg
cttaattctgaatggtcagaaagagtttattttatatacaaaatactactgacgctttgc
ccatgttgttttctacacataaagcttaaggagaacatagagaggttttttacatgcttt
gtagaagaggggaaagccaccgtacgacttaaagaacccatggtggacatctgcatgagc
aaggcggatactgccagcttgaaaaccttcctttcagctgctcaacttgcacacagagga
aactgtagagacagctttgcactttccacactaaccccagttcgtgccagagatgtggag
aaacccaaaaagaagctcaccatcatgtccaagaaggactatccactcacatctagcttc
ccgtactcgctggagcagctgcaagtgtcttactgcaagctgtccagggtggacatgcgc
atgttgtgtctaaaatcactgcgaacacttgacctcagtaataaccatatcaagaagctc
ccagacaccatcggggatctccgcttcctgacagaactgattcttaacaacaaccgtttg
gagagcttcagtgaagcactgtgcctctccagtctgcagaaatctttgcagcgtctggac
ctgagccaaaactgcataaagctgctgcctgcttgcttttgcaagttgtgtgagcttgtt
acacttaaaatggatgacaatgagctggtaaggctgcccttccacattggccggctcacc
aaaatgcgttttctgtcagcggcccataataagctcactgtgctgcctggagacttccgc
aagctgtctctggagaacctggacctgtttgggaacccttttgttcaacctaatcctttt
gatcacagcattcagctcacattacctctcagtctcgaggagctggcttccagagctgtg
ctcaactatagaatcccttatggacctcatctcattccctttcacctttgtggcaaaatg
gaactggcaaaggtgtgcaactgcggctgttcctgtgtaagctcgcatatacagacggct
gtgagcatgaacctacaccaagtctcccacactgtggtgcttgtagataacatgggaggc
acagaggctcctattcagtgccatttctgctcgctcacatgctactgccagttcctggac
ggctgtgcgcagagaggcctgagctga
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