Clarias gariepinus (North African catfish): 128536194
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Entry
128536194 CDS
T10780
Symbol
gja1a
Name
(RefSeq) gap junction alpha-1 protein
KO
K07372
gap junction alpha-1 protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
128536194 (gja1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128536194 (gja1a)
Transporters [BR:
cgar02000
]
Other transporters
Pores ion channels [TC:
1
]
128536194 (gja1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
Connexin43
Motif
Other DBs
NCBI-GeneID:
128536194
NCBI-ProteinID:
XP_053366342
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All DBs
Position
13:complement(30690695..30692418)
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AA seq
358 aa
AA seq
DB search
MGDWSTLAKLLDKVQVYSTAGGKLWLSVLFIFRILVLGTAVESAWGDEQSAFECNTQQPG
CENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLGHVLFLMHKDEKLKKKEERLRKAEREG
SNVHARLHKILAKKFKYGLEEPGKIKMRGALFYTYIISVVLKSVFEVAFLLIQWYLYGFH
LSAVYTCERFPCPHKVDCFLSRPTEKTVFIMFMLVVSLISLCLNVFEFFYAIFKRMKDHF
KEAEKLLVMESTIRPCPREDMSSYGYHCSAPESNLGYNLDAADKSNSSDNFDKQANEQNW
TNYSTEQNQLGQRDYCPSQTFVYPQKMPLGKDLMLLKQLDPRPQSRSSSRARPDDLDI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactggagcaccttggcaaagctccttgataaggtgcaggtgtactcgacagcc
ggaggtaagctgtggctctccgtcctcttcatcttccgtatcctggtgttgggaacggcc
gtggagtctgcgtggggcgacgagcagtcggcgttcgagtgcaacactcagcagccgggc
tgtgaaaacgtctgctacgacaaatccttccctatctcgcacgtgcgcttctgggtcctg
cagattatcttcgtctcggtgccgacgctcctctacctgggccatgtgctcttcctcatg
cacaaggacgagaagctgaagaagaaggaagagaggctgcggaaagcggagagggaaggg
agcaacgtccacgctcggcttcacaagatcctggccaagaagttcaagtacggtttggag
gaacctggaaagattaaaatgagaggagccttgttttatacctacatcataagcgtggtg
ttgaaatcggtcttcgaggtggcgttcctgctcatacagtggtacctttacggattccat
ttatcagccgtatacacgtgcgagaggttcccttgcccgcataaagtggattgcttcctg
tctcgtccgacggagaaaaccgtgttcatcatgttcatgctggtggtgtcgttaatctcg
ctttgccttaacgtctttgagtttttctatgccatcttcaagaggatgaaggatcatttc
aaggaggctgagaagctgctggtcatggagagcacgatcagaccatgtcctcgagaagac
atgtccagctacgggtaccactgctccgctcccgagtctaatctaggctacaacctggac
gcagctgataaatccaattcctcggataattttgacaaacaagccaatgagcagaactgg
actaactacagcacggagcaaaatcagctcggccagcgagattattgcccgtctcagacg
tttgtgtacccacagaaaatgcctttaggtaaagacctcatgcttcttaagcagctcgat
cctcgtccccagagtcgctctagcagtcgtgcccggcctgatgacctggacatctag
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