Clarias gariepinus (North African catfish): 128536230
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Entry
128536230 CDS
T10780
Symbol
psen1
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04310
Wnt signaling pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128536230 (psen1)
04330 Notch signaling pathway
128536230 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128536230 (psen1)
Peptidases and inhibitors [BR:
cgar01002
]
Aspartic peptidases
Family A22: presenilin family
128536230 (psen1)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
128536230
NCBI-ProteinID:
XP_053366379
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All DBs
Position
13:475007..485086
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AA seq
455 aa
AA seq
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MADNAPEVVNNVPRDGAESNQHTDTGRSSARLRRDVELNGQPPSSHAPQVVTDNEEEEDE
ELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQKDGQQLIYTPFREDTDTVGQRAV
NSILNATIMISVIVVMTLVLVLLYKYRCYKVIHAWLFFSSLLLLFFFSFVYLLEVFKTYN
VAMDYFTLAVIIWNFGVVGMICVHWKGPLRLQQAYLIMISALMSLVFIKYLPEWTAWLIL
AVISVYDLLAVLCPKGPLRILVETAQERNEPMFPGLIYSSTMVWLVGMADTAETRNNSSE
AAPKQEDLVATAPVAQPEDEGGFTPDWVDQQEHRLGPLQSTEESRRQIQQMASARPPPPD
DDEERGVKLGLGDFIFYSMLVGKASATASGDWNTTLACFVAILIGLCLTLLLLAIFKKAL
PALPISITFGLIFYFATDNLVRPFMDQLAVHQFYI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgcaccagaggtggtcaataatgtgccgcgtgacggagccgagtccaac
cagcacacggacacgggcagatcttcggcccggttacggagggatgtggagctcaacggc
cagcctccgtccagtcacgccccacaggtggtcaccgacaatgaggaagaggaggatgaa
gagctgactctaaaatacggagccaagcacgtcatcatgttattcgtcccggtcacgcta
tgcatggtggtcgtcgtggcaaccattaagtcggtcagcttttacacgcaaaaggatgga
caacagctcatctacacccctttccgcgaagacaccgacaccgtgggccagcgcgccgtc
aactccatcctcaacgccaccatcatgatcagtgtgatcgtagtgatgacgctggttctg
gttctgctctacaagtaccgctgctataaggtgatccacgcctggctgttcttctcctcg
ctgctcctgctcttctttttctcctttgtttatctgctagaggtgtttaaaacgtacaat
gtggccatggactacttcacgctggcggtgatcatttggaatttcggtgtagtgggaatg
atctgcgtgcactggaagggtcctctacgtctgcagcaggcttatctcatcatgatcagt
gccctcatgtccctggtgttcatcaagtacctgcctgagtggaccgcctggctcatcctc
gccgtcatctccgtctacgacctgttggccgtgttgtgccctaaaggaccccttcggatc
ctggttgaaacggctcaagaaaggaacgaaccgatgttcccgggactcatctactcttcg
actatggtgtggctggtcgggatggcggacaccgcagagacgaggaataattcgtcagaa
gccgctcctaaacaagaggacctcgttgcgacagctccagtggctcagccggaggacgaa
gggggtttcacgcctgactgggtcgaccaacaggagcatcgtctcggcccgctgcagtcc
accgaggaatcacggcgtcagatccagcagatggcgtcagcgcgcccacctcccccagat
gatgacgaggagaggggtgtaaagctaggacttggtgacttcatcttctacagtatgctg
gtgggaaaggcttcagctacagccagcggggactggaacacaacgctagcctgctttgtg
gccattcttattggtttgtgtctcacactcttgctcttggccatctttaagaaagccctc
ccagcccttcccatctccattaccttcggattgatcttctatttcgccacagacaacctg
gtgcgcccgttcatggaccagttagccgtgcaccagttctacatatag
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