Clarias gariepinus (North African catfish): 128536245
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Entry
128536245 CDS
T10780
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128536245
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128536245
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
128536245
NCBI-ProteinID:
XP_053366400
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All DBs
Position
13:complement(15419251..15656955)
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AA seq
973 aa
AA seq
DB search
MIRIFPDFSVQVTAAAGAGAAGMPAARVPGATNGNPQNVQGLTTYQQSEPYWERPANASS
CSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITS
QLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSAVASEIF
EPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGDQVEM
AEQLGMKLPPGRSLLSQGAGAEDGASSASSSSHSETPEPVESSSPSHPSPDNTLERSFFI
RMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHNRTVPNQIMGMVVVAHALPPPTINE
VRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIIGKRCYQFIHAEDVECIRHSHLDL
INKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDTPMDI
TQLPNLPEKASESSETSDSESDSKDNSEDNENSKSDGKGNQSSENSEEPESDSKKSARHS
EQEMRHQEEDSSSNAESQESEDSLEPSDCEAEHKENRLAHLSGLPIKVEHYGDGDGAELH
NSLSSSSEEEDEEDEEEEEDNDEIMKDYNSDGELSGSLTSKRQKRKKRRKKQKWEGSRQR
LRLSPPEDVTASPGSLEPALGEQPPLLPPPSPATASVLKIKTEMAEPINFDNDSSIWNFP
PNREISRNESPFSMTKPPSAHEAFPAAIPDSVLTPPGTEGGGIRKPNFTNNSSSSSSNSA
PTSASLAPPLSNSSNSDPLSPPLSASPRDKQQGTPTSQNSLLYSGDLEALQRLQTGNVVL
PLVQRVAGTLAATSTAAAAPRVYTAGTIRYAPADVTLAVQGNLLPSGHAAVNFVDVNGPG
FGIDAKTPMEMLYHHVHRLNMSGPFGGAGTGASLAQMPTANVFTTAEGLFSTLPFPVYSN
GIHTTQTLERKED
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggacttcagcgtgcaggtgacggcggcggcgggcgcaggagcc
gcagggatgccggcagcacgagtcccgggcgccaccaacggcaacccgcaaaacgtccag
ggcttgaccacttaccaacaaagcgaaccttactgggagaggccagctaatgccagctcg
tgctcagccactaggcccaagacacttcacctaggagggcaacaacatacctcatcacca
tggttgcaggcgctgaggaaggagaagtcacgtgatgcagcacgctcgcgcagagggaag
gagaactttgagttctacgagttggccaagatgctgccactgccaggtgccatcaccagc
cagctggacaaagcctccatcatacgcctcaccatcagctacctgaagatgagggacttc
gccaaccagggcgacccgccatggaacctgcgcatcgaaggaccaccacccaacacctca
gtcaaagctattggctcgcagagaagaaggagccccagtgcagttgcctcagagatcttt
gagcctcacctgggcagccacatcctacagtccctggatggattcgtatttgcactaaac
aaggaggggaggtttttgtacatctcagagaccgtgtccatatacctcggcctttcacag
gtggagttgacaggcagcagcgtgtttgactacgtacaccctggtgatcaggtggagatg
gccgagcagttgggaatgaagcttcctccaggccggagtctgctgtctcagggagccggg
gctgaggacggtgccagctcagcctcctcatcctcacactctgagacacctgaaccagta
gagtccagcagtccgagtcacccctctccagataacactttggagcgttccttcttcatc
cgaatgaagtccacgttgactaagagaggcgtccacatcaagtcctctggctacaaggtg
atccacatcacaggcaggctgaggataagaatggcactaacgcacaatcgcacagtgccc
aatcagattatgggcatggtggtggtggctcatgccctccctccccccaccattaacgag
gttcgcatcgactgccagatgttcgtcacgcgggtcaacatggacctcaacattgtctac
tgtgaaaatagaattagtgactacatggacctgacacctgtggacatcatagggaaaaga
tgctatcagtttattcatgccgaggacgtggagtgtattcggcacagccatctagactta
ataaataaaggccagtgtgtgacaaaatactatcgctggatccagaagaatggaggctat
atctggatccagtccagtgccactattgcgattaacgccaagaatgccaatgagaagaac
atcatctgggtcaactatgtgcttagtaatccggaatacaaagacacacccatggatatc
acacagcttccgaatctcccagagaaagcctcagaatcctcggaaacgtctgactcagag
tctgactctaaggacaactctgaagacaatgagaactccaagtcagacggaaaaggaaat
cagtcctctgagaacagtgaagagcccgagtcagacagtaagaagtctgccagacattct
gagcaagagatgaggcatcaggaggaggatagctccagtaatgcagagagccaggagagt
gaggacagcttggagccctctgactgtgaagcagagcacaaggagaaccgcttggctcac
ctcagtggtctacccattaaagtggagcactatggggatggagacggagcagagcttcac
aattcactctcatcctcctctgaagaagaagatgaagaggatgaggaggaagaagaagac
aatgatgagattatgaaggactacaatagtgatggggaactgagtggttcactgacaagt
aaacgtcagaagagaaagaaaaggagaaaaaagcagaaatgggagggcagtcgtcagcgt
ctgcgactttcacccccagaggatgtcacggcgagtccaggaagtctggagccagcactg
ggagagcagcctcctctactcccgcctccatcacctgccactgcctcagtgctcaagatc
aaaactgagatggccgagcctatcaactttgacaacgacagcagtatctggaacttccca
cctaatcgcgagatctcacgcaatgagtcacctttcagtatgaccaagcctcctagtgcc
cacgaagcttttcccgccgctattcctgactcagtcctcactccaccaggcactgaagga
ggaggcatcaggaagcccaactttaccaacaacagcagcagtagtagtagtaatagtgcc
cccacctcagctagcttggcacccccattgtctaattcctcaaattctgaccccctatca
ccgccactttcagcctccccacgtgataagcagcagggaactcccacctcccagaattcc
ctgctgtacagcggtgatctggaggccctacagcggttacagacaggcaatgtggtgctt
cctctggtgcagcgtgttgcaggcacactggctgccaccagcacagcagcagcagcacca
cgtgtctacacggcaggcaccattcgctacgcacctgctgacgtcacattggctgtgcag
ggcaacctgctaccaagcggtcatgccgcagtcaactttgtggatgtgaatgggccaggc
tttggtattgatgccaagactcccatggaaatgctctaccatcatgtgcaccggctcaac
atgtcaggtccatttggtggcgcaggcactggtgccagtctcgcacagatgcccactgcc
aatgtcttcactacagcggagggactcttttcgacactccccttccctgtctacagcaat
ggtatccacacaacacagactctcgagcgcaaagaagattga
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