Clarias gariepinus (North African catfish): 128536278
Help
Entry
128536278 CDS
T10780
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00280
Valine, leucine and isoleucine degradation
cgar00650
Butanoate metabolism
cgar01100
Metabolic pathways
cgar04146
Peroxisome
Module
cgar_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
Enzymes [BR:
cgar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
128536278 (hmgcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128536278
NCBI-ProteinID:
XP_053366447
LinkDB
All DBs
Position
13:complement(8076824..8084923)
Genome browser
AA seq
331 aa
AA seq
DB search
MAAVRMRIVHTAFRPGFCFSAAGAKTISLCATKPLPERVKIVEVGPRDGLQNEKTIVPAE
VKIRLIDMLSEAGLPVIEATSFVSPKWVPQMADQEEVMQGINRKPGVNYPVLTPNLKGYR
AAVKAGAKEVAIFGAASELFSKKNINCSVEESLQRFEEVMAAGKQEGIPVRGYVSCVLGC
PYEGKVSPLKVAEVAKRMYAMGCYEISLGDTIGVGTPGSMSQMLEAVMKEVPVDALAVHC
HDTYGQALANILVALQKGISVVDSSVSGLGGCPYAQGASGNVATEDVVYMLQGLGIHTGI
DLQKLMDAGAFICRSLNRRTSSKVSQALCKL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaggatgaggattgtacacactgcgttccggcccggcttctgtttctca
gcggctggggccaaaactattagtttgtgtgctaccaagcctcttcctgaaagggtgaag
attgtggaagttggaccgagggacggactgcagaatgagaagaccattgttccagctgaa
gtgaagatccgtctgattgacatgctctctgaggcgggacttcctgttattgaggccacg
agttttgtctctccaaaatgggttccacagatggctgatcaggaggaagtgatgcaaggc
atcaacaggaaacctggagtgaattatccagtgctgactcctaatctgaagggttacaga
gctgctgtgaaggcaggtgcaaaggaggtggcaatattcggcgctgcttcagaactcttt
agtaagaagaacataaactgctctgtggaggagagtctacagcgctttgaggaagtgatg
gcagctggcaaacaagaagggatccctgtacgaggctatgtgtcttgtgtcctgggatgt
ccttacgaaggaaaagtctcgccgctgaaggtagccgaggtggcgaagcgtatgtacgcg
atgggctgttacgaaatctcactgggtgacacaatcggtgtgggtacgccaggcagcatg
tctcagatgctggaggcggtgatgaaggaggtgccggtcgacgccctggctgttcactgc
catgacacatacggccaggcgctcgctaacatcctggtcgctctgcagaagggcatcagc
gtcgttgactcgtctgtatcaggtttgggtggctgcccgtacgctcagggggcttctgga
aacgttgcaactgaagacgttgtgtacatgctgcaaggactcgggatccatacgggaatc
gacctgcagaagctgatggatgctggagcgttcatctgccgctctcttaacagacgaacc
agttccaaagtttctcaggctttgtgcaaactgtga
DBGET
integrated database retrieval system
