Clarias gariepinus (North African catfish): 128536278
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Entry
128536278 CDS
T10780
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00280
Valine, leucine and isoleucine degradation
cgar00650
Butanoate metabolism
cgar01100
Metabolic pathways
cgar04146
Peroxisome
Module
cgar_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
128536278 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
128536278 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128536278 (hmgcl)
Enzymes [BR:
cgar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
128536278 (hmgcl)
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
128536278
NCBI-ProteinID:
XP_053366447
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Position
13:complement(8076824..8084923)
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AA seq
331 aa
AA seq
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MAAVRMRIVHTAFRPGFCFSAAGAKTISLCATKPLPERVKIVEVGPRDGLQNEKTIVPAE
VKIRLIDMLSEAGLPVIEATSFVSPKWVPQMADQEEVMQGINRKPGVNYPVLTPNLKGYR
AAVKAGAKEVAIFGAASELFSKKNINCSVEESLQRFEEVMAAGKQEGIPVRGYVSCVLGC
PYEGKVSPLKVAEVAKRMYAMGCYEISLGDTIGVGTPGSMSQMLEAVMKEVPVDALAVHC
HDTYGQALANILVALQKGISVVDSSVSGLGGCPYAQGASGNVATEDVVYMLQGLGIHTGI
DLQKLMDAGAFICRSLNRRTSSKVSQALCKL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaggatgaggattgtacacactgcgttccggcccggcttctgtttctca
gcggctggggccaaaactattagtttgtgtgctaccaagcctcttcctgaaagggtgaag
attgtggaagttggaccgagggacggactgcagaatgagaagaccattgttccagctgaa
gtgaagatccgtctgattgacatgctctctgaggcgggacttcctgttattgaggccacg
agttttgtctctccaaaatgggttccacagatggctgatcaggaggaagtgatgcaaggc
atcaacaggaaacctggagtgaattatccagtgctgactcctaatctgaagggttacaga
gctgctgtgaaggcaggtgcaaaggaggtggcaatattcggcgctgcttcagaactcttt
agtaagaagaacataaactgctctgtggaggagagtctacagcgctttgaggaagtgatg
gcagctggcaaacaagaagggatccctgtacgaggctatgtgtcttgtgtcctgggatgt
ccttacgaaggaaaagtctcgccgctgaaggtagccgaggtggcgaagcgtatgtacgcg
atgggctgttacgaaatctcactgggtgacacaatcggtgtgggtacgccaggcagcatg
tctcagatgctggaggcggtgatgaaggaggtgccggtcgacgccctggctgttcactgc
catgacacatacggccaggcgctcgctaacatcctggtcgctctgcagaagggcatcagc
gtcgttgactcgtctgtatcaggtttgggtggctgcccgtacgctcagggggcttctgga
aacgttgcaactgaagacgttgtgtacatgctgcaaggactcgggatccatacgggaatc
gacctgcagaagctgatggatgctggagcgttcatctgccgctctcttaacagacgaacc
agttccaaagtttctcaggctttgtgcaaactgtga
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