Clarias gariepinus (North African catfish): 128539338
Help
Entry
128539338 CDS
T10780
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128539338 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128539338
NCBI-ProteinID:
XP_053366643
LinkDB
All DBs
Position
1:complement(37784577..37876072)
Genome browser
AA seq
2056 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLHAVPDEIYRYTRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPETIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQSLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNQLEVLPDALGALPNLRELWLDRNQLSSLPSDLGGLRRLVCLDVSENRLTELPSEIS
GLIALTDLLLSQNHLEAMPDSIGSLKQLSIFKVDQNRMVRLTDSIGECENLTELMLTENL
LQSLPSSLGKLKKLTNLNVDRNRLSSVPSELGGCASLSVLSLRDNRVGKLPAELANATEL
HVLDVAGNRLQNLPFSLANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SSSLENLLQSSVDESWPTDTNLNRVSVIQFQDQTKPDEEDDETAAERRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEDLDSPGTEEKRMSGLSNQSHDSQVSNSTASANSHEEA
RKVNGIEAEHVGRHEHEQEDEDDEAEYTEPTVHFAEEPIIRGGDEDDDDENDDDEDGERS
DDEARSAPFPAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLEGFSSDAQTSASRIPTD
EKDGGGDEEEDDDEEEEGTSVNTPLLRRLEAAEQEDSRLSQVNSSLQPVKGVSFDQVNNL
LIEPARIEEEELVLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVK
VGDKLLEVNDVDLQGAEHHTAVEALRSSGAAVTMIVLRERMVEPENPITTTPLRPEDDYF
PRERRSTGLPFNLEPGSTAINTGPCQRLATCLIRNDKGLGFSIAGGKGSTPYRTGDVGIF
ISRIAEGGAAHRDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTISLLVEREQAST
GGSPGRARSHSPPPPEPSDSPEQDETGDERLGNHLSCPMEDEYPIEEVMLVKTGGPLGLS
IVGGSDHASHPFGISEPGVFISKVIPHGLACQSGLRVGDRILEVNSIDLRHATHQEAVKA
LLSNNKEIRMLVRRDPSPPGMQDIMICKQPGEKLGISIRGGARGHAGNPFDPTDEGIFIS
KVSSCGAAARDGRLKVGMRILEVGNHSLLGMTHTEAVRVLRGTGDTLVMLVCDGFDPRNV
AGMEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMEIMQKEVEMVRETSQWEREEM
EKVERMRLEREAATRLLEEETESMSTGPLKLDYKTLAALPTTSLQRVNRLTSSFTESHPM
ETALQARPSGSIEALCFETAHATLYHVDTPDSSSLYPIATSEAPRQSAAMPQDPSPAPTV
PQETQEEECLVDSQPICFKENPFLVANRKNKGRPLEERILSGLPTGYGRQGNLQTWLYNK
SPSADPPRIDSPVREPLYSPGSQLPSFRQSSPSTPVAQGRETRFANIHSSSNVTPKDSSA
TKPGAIQPISRVRPPASPVGQDGHSSPNPFQHGPSPVNSQTTPRAPSPDTFNEFPINVKQ
AYKAFAAVPHSMAVLEPSQDLYGQRNNFHPKQKLSEPEECNEVFIDEGEGAGLSPRPSLL
SDRREYRNMAAVPRLSRPSLESQPPTSVGRGTPEQRSFRDRQKYFEIDVKQQIPDNKPKP
RVSLVGEDDLKKMKEEEAKRIEQRAREYLLDEDEDDDEEDLPKQLAQVKAQGKVILDGVE
YKVESLSGHSPTPPRQCSTPPNYSATPPSYCGSSGTSSVDGRGDSQRNSMEDSFRLEQRP
NSMTGLIPVYPGESAAPIRTAKAERRHQDRIRMQSPELSVASDKELSPAEKRALEAEKRA
MWRAARPYGLEEDVRLYEQDLAKRLYQSRVRASLDSAPAPPSTCSSSSEPRMKSLEQDAL
KAQMVIAKSKDGRKRGTLDQLAESPSPAPTPSPTPMEDFSPRAVTSPGRLSLSEKKFDYR
QFAAIPSSKPVYDIQSPDATDVRFNNDASTSPVSCVEAEIPVAAVAATSALEEMALYSNK
RKLRQGRRSLETAVPT
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatccctctctggcggtgtaaccgccacgtggagtcggtggataagcgg
cactgctccctgcacgccgtgcccgatgagatctaccgctacacccgcagcctggaggag
ctcctgctggacgccaaccagctccgagaactgcccaagcccttcttcagactcctgaac
ctgcgaaagctgggcctgagtgacaatgagatccagagacttcctcctgaggtggccaac
ttcatgcagctggtagagctggacatctctcgaaatgacattcctgagatccccgagacc
attaagttctgtaaggcgctggagattgcagacttcagtggaaaccccctctccagatta
cctgatggctttacacagcttagagcactagcccaccttgcactcaatgatgtgtcacta
caatcactaccgaacgacattggaaacttggctaacctggtaaccctggagctgagggag
aacctactgaagtctttacccacctcactgtccttcctggttaaactggaacagcttgat
ttgggcagcaatcaactggaagtattgccggacgcactaggggcactgcccaacctccga
gagctgtggttggacaggaaccaactttcttcactcccatcagacctgggaggtttgcga
cgtttggtgtgtctggatgtttcggagaaccggctcacagagttgccctccgagatcagc
ggcctcatcgccctcactgacctgctgctttcgcaaaaccatctagaggccatgcctgac
agcatcggctctttaaagcaactgtcaatcttcaaagtggaccagaaccgcatggtgcgt
ctaacagattcgataggcgaatgtgagaacctcacagaactgatgctgaccgagaatctg
ctacagtctcttcctagttctctgggaaagctaaagaagctgaccaacctgaacgtggac
cgtaaccgcttgagcagcgtcccatctgaattaggtggttgtgccagtctcagcgtgctc
tcacttagagacaaccgtgtaggcaagctgcctgctgagctcgcaaacgctactgagcta
cacgttttagatgtggcaggcaacaggttgcagaacctgcccttctcgctagccaatctg
aacctcaaggccatgtggctggcagagaaccagtcgcaacccatgctcaagtttcagacc
gaggatgacgagcggacaggagagaaggtcctcacctgctacctgctgccccagcagcct
tcatccagcttagagaacctgctgcaaagcagtgtagacgaaagctggcccacagacact
aatctgaacagagtgtccgtcatccagttccaagaccaaaccaagcccgatgaggaagat
gacgagaccgcggcagagagacggcagggcctgcagcggcgagccacccctcatcctagt
gagctgaaggtgatgaagaatgtaatcgaagccagaagaaatgaggcttacacggctaag
cctgatgaagacctggactccccgggcactgaggagaaacgtatgagtggattgtccaat
cagagccatgactcccaggtctctaacagcactgcctcggctaactctcatgaagaggcg
cggaaagtaaacggcattgaggcagagcatgttggaaggcatgagcacgaacaggaagat
gaggacgatgaagcagaatacactgagcccactgtgcactttgctgaggagcccattatc
cgcggcggtgatgaagacgacgacgatgaaaacgatgatgacgaggatggtgagcgtagc
gacgacgaggcccgctcggctcctttccctgctgagaaacagcgcctcatccgcaaagac
acgccacactacaagaagcacttcaagatcaccaaactgcccaaacccgaggccgtagcc
gcgttactagagggcttcagctctgacgcccaaacatcagcctcacgaatacccaccgat
gagaaagatggagggggggacgaagaagaagacgacgatgaggaagaggagggaacatca
gtaaacactcctctgttacggagactggaagctgcagagcaagaggacagcaggctgagt
caggtgaacagctcgctgcagccagtgaagggggtgtcatttgatcaagtcaataatctg
ctgattgagcctgctcgaattgaggaggaagagctggtcctgagcatcctgagacaaact
ggtggattaggcatcagtatagctgggggtaaaggatccactccttacaagggagatgat
gagggtatctttatttcccgagtgtcagaagagggaccagctgcacgagctggggtcaaa
gtgggagacaaattacttgaggtaaacgatgtagatcttcagggggcagagcaccacacg
gcggtggaggccttgcggagttcaggagcggcggtgaccatgattgtactgcgtgagcgg
atggtagagcctgagaaccctatcaccactacacccctgagaccagaggatgattacttc
ccccgggagaggaggtccaccggccttccattcaacctggagcctggatccaccgctatt
aacacgggcccctgccaacgtctggccacctgcttaatccggaacgacaagggtttaggc
ttcagcattgcggggggaaaaggctccacaccatatcgcacaggagacgtgggaatcttc
atctctcgcattgctgaaggaggtgcagcacatagagacaacatccttcacgtgggagac
agagtcatatcaatcaatggtgtagacatgacagaagccagacatgaccaagcagtagcg
ctgcttaccggcacttcccccaccatctcactgctagtggagcgggaacaagcgagcacg
ggcggctccccgggccgagcgcgctcccactcgccaccacctccggagccctcagactca
ccagagcaagacgagaccggagatgaacgcctgggaaaccatcttagctgtcctatggag
gacgagtaccccatagaggaagtgatgctggttaaaacaggtggtcctctgggtctaagc
atcgtggggggcagtgaccatgcgagccacccattcggcatcagtgaacctggagttttt
atttcaaaggtgatccctcatggcttggcttgtcagagcggtttacgtgtaggtgaccgt
atcctggaggtaaactccatcgacctgcgacacgccacccaccaggaggccgtcaaagcc
ctgctctccaacaacaaagagatccgcatgctagtgcgcagagacccctcgccccctggc
atgcaggacattatgatttgcaagcagcctggagagaagctgggcatcagcatccgagga
ggagccagaggacacgcgggcaaccccttcgatccaacagatgaaggcatcttcatctcc
aaggtgagctcttgcggtgccgcagcacgagatggccgtctgaaagtgggtatgagaatc
ctggaggtgggcaatcacagtctccttggtatgactcatacggaggcagtcagagtcttg
cgtggcactggagataccctggttatgctggtgtgtgatggcttcgaccccagaaacgtc
gcaggcatggaggcatctccaggtatcatcgcaaacccgttcgctgctggaatcgttcgg
aagaacagcatggagagcatctcctctatagaccgagacctgagcccagaggaaatggaa
atcatgcagaaggaggttgagatggtgagagagacgtctcagtgggagcgggaggagatg
gagaaagtggagcgtatgcgcttggaacgtgaagcggctactcgtctgctcgaggaagag
actgagagcatgagcactggacctctgaaacttgactacaaaacactggcagctcttccc
acaaccagcctccagagagtcaatcggctaacttcttcctttactgaatctcatcccatg
gagactgctcttcaggccaggccatctggctctatagaagccctgtgctttgagacagct
cacgcaaccctgtaccatgtagatacccctgactcatcctcactgtacccaattgcgacc
tcagaagcacccagacaatctgcagctatgccgcaggaccccagtccagcacccacagtc
ccacaggaaacacaggaagaggagtgtcttgtggactctcagcctatttgtttcaaagaa
aatcccttcctggtagctaatcgtaagaacaagggccgcccccttgaggagcgcatcctt
tcagggctgcccacaggctatggcaggcaggggaaccttcagacctggttgtataataag
agtccatcagctgatcccccaagaattgatagtcctgtccgggagccactttattcccca
ggttctcaactgccatcatttcgccagtcctcaccctcaacccctgttgcacaaggcagg
gagacccgatttgcaaacattcattcatcttccaatgtgactcccaaggacagttcagct
accaagcctggtgccatccagcccatctcacgggtacggcctcctgcctctccagtcggt
caggatggacacagtagtcccaaccctttccagcatggcccttcccccgtcaactcccag
accactcctcgggccccatccccagatactttcaacgaatttcccatcaatgtcaagcag
gcatataaggcgtttgctgctgtgccccactccatggctgtgctggagccctcacaggat
ctctatggtcagaggaacaactttcacccaaagcaaaaactgtcagagccagaggagtgt
aatgaagtgtttatagatgagggtgaaggagcgggcctcagccctcgcccctccctctta
tctgatcgccgtgagtacaggaacatggcagctgtgccacgtctgtcccgcccctccctg
gagtcacagccccccacatctgtcgggagaggtaccccggagcagcggtctttcagagac
agacagaagtactttgagatcgatgtgaagcagcagataccagacaacaaacccaaacct
cgcgtttctcttgtaggagaggacgacctgaaaaaaatgaaggaagaagaagccaagaga
attgagcagcgagcacgggagtatctgctggatgaggatgaggatgatgatgaggaagat
ttgccgaagcagttggcacaggtgaaggcccagggcaaggttattctggatggcgtagag
tacaaggttgagtctctgagcggccactctcctactcctcccaggcaatgctcaacacct
ccaaactacagtgccacgcctcccagctactgtggcagctcagggacttcctctgtagat
ggtaggggtgattcccagcgcaactcaatggaagatagcttcagactggagcagagaccc
aactccatgactggtctgatccctgtgtaccccggcgagtccgcagctcccatccgtact
gccaaggctgagcgccggcaccaggacaggattcgtatgcagagcccggagctcagtgtg
gcctcagataaggaactttcccctgcggagaaacgggccctagaggcagagaagagagcc
atgtggagggcagccaggccttatggtctagaggaagacgttagactgtatgagcaagac
ctggccaagaggctgtaccagtcgcgtgtgagggcgtcgttagacagtgctccagctcct
ccctccacctgctcatcttcctctgagcccaggatgaagtctttagagcaggatgctctc
aaggctcagatggtcattgctaagtccaaggatgggagaaagcgaggcactctggatcag
ttagctgaatcgccgtctcctgctcccacgccttcacccactcctatggaagatttcagt
cctcgcgctgtgacgtcaccaggtcgactgtccctgtcagaaaagaagtttgactaccga
caattcgctgccattccttcttctaaacccgtatacgacattcagtctccggatgccaca
gatgttcgattcaacaatgatgcctctaccagcccagtgtcctgtgtagaagctgagatt
cctgtagctgctgtggccgccacgtccgctctggaggagatggctctgtacagcaacaag
cggaaactccgacagggccgacgcagtctagagacagctgtccccacataa
DBGET
integrated database retrieval system
