Clarias gariepinus (North African catfish): 128540579
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Entry
128540579 CDS
T10780
Symbol
hexa
Name
(RefSeq) LOW QUALITY PROTEIN: beta-hexosaminidase subunit alpha
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00511
Other glycan degradation
cgar00513
Various types of N-glycan biosynthesis
cgar00520
Amino sugar and nucleotide sugar metabolism
cgar00531
Glycosaminoglycan degradation
cgar00600
Sphingolipid metabolism
cgar00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cgar00604
Glycosphingolipid biosynthesis - ganglio series
cgar01100
Metabolic pathways
cgar04142
Lysosome
Module
cgar_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
128540579 (hexa)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
128540579 (hexa)
00513 Various types of N-glycan biosynthesis
128540579 (hexa)
00531 Glycosaminoglycan degradation
128540579 (hexa)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
128540579 (hexa)
00604 Glycosphingolipid biosynthesis - ganglio series
128540579 (hexa)
00511 Other glycan degradation
128540579 (hexa)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128540579 (hexa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cgar03110
]
128540579 (hexa)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
128540579 (hexa)
Chaperones and folding catalysts [BR:
cgar03110
]
Intramolecular chaperones
Others
128540579 (hexa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
NPIP
Motif
Other DBs
NCBI-GeneID:
128540579
NCBI-ProteinID:
XP_053366703
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All DBs
Position
2:23732954..23738089
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AA seq
329 aa
AA seq
DB search
MSFRKDESSIIYIFPFPDNVSVLTGDAVLRAXLVWGFLRGLESFSQLVYQDYNLYYVNKT
EIEDFPQFPFRGLLLNTKALFTSTVNAILKTLXRLACKIDIHWHIVDDPSFPYKSHSYPD
LSNKGAFHSVTHVYMQSDVRRVIVRARSRGIRVVPEFDSPGHTESWGXGQPDLLTPCYRR
IVPTGTFGSINPMLRSNYQFMSSLLKEVTSVFPDSFVHLGGDDVDIKCWKSNSSVQAFIG
KTGFGDDXTKLESYMESIMNIKAAFNKTSIVXQAVFDYHKQRRAQYVVEVWKRRCYLYKM
KVILGAPIYLDLPGLTHDWARFYNVHPLL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagctttagaaaagatgagagcagcattatttatatttttccttttccggataatgtg
agtgtgctgacaggtgacgctgtgctaagagcatagttagtgtggggattcctgagaggt
ttggagtcctttagtcagctggtataccaagattataacttatattatgtaaataagaca
gaaattgaagacttcccacagtttccatttagagggcttttgctaaacactaaggcatta
tttaccagtacagtaaatgctatattgaagactctgtaacgactggcatgtaaaatcgac
attcactggcacattgtggatgatccttcttttccttacaaaagccacagttatcctgat
ttaagcaataagggagcctttcactctgtgactcacgtttacatgcagtcagatgtgagg
agggtgatcgttcgcgcaaggtcccgaggaatcagggtggtgccagagtttgattcccca
ggacacactgaatcatggggttaagggcagccagacctgctgacgccctgttacagaaga
attgttcccactgggacatttggctcgatcaacccaatgttgagatccaattaccagttc
atgagtagcctcttgaaagaggtaacctctgtatttcctgactcttttgttcatcttgga
ggcgatgatgttgacattaaatgctggaaatcaaattctagtgtgcaggcatttatagga
aaaacgggctttggagatgattaaaccaaactagagtcttacatggaaagtattatgaac
atcaaagccgcttttaacaagacctccatcgtttgacaggctgttttcgattatcacaag
cagagaagggcccaatatgtggtggaggtgtggaaaagaagatgctacttgtataagatg
aaggtcattttgggggcaccaatctatctggacctgccaggactcacacacgactgggct
cggttctacaatgtgcatcctctcctttag
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