Clarias gariepinus (North African catfish): 128540796
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Entry
128540796 CDS
T10780
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128540796 (mms19)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128540796 (mms19)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128540796 (mms19)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
128540796 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
Sec7-like_HUS
Adaptin_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
128540796
NCBI-ProteinID:
XP_053366747
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All DBs
Position
14:5983716..6010288
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AA seq
1024 aa
AA seq
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MAAHLLALVEEFVSGQDDSSAANIATGVKAEQFSILQLVEALGLSLTSSQTQTRGRGVQL
LSQVLQECYGGLSESELKVLVTFYENRLKDHYAITPHVLHGLSALAKCTVLPPGSAVSIL
KALFQDVHVQSLMLTERSYAYKILISLMDSREDELKGLGPDFVFGFVQAVDGERDPRNLL
LAFQIARNIIHRGYDFNQFTEELFEVTSCYFPIDFTPPPNDPHGITQEDLILALRAVLTG
TPRFAEFLVPLLIEKIDSDVQNAKVDSLLTLADCAPVYGHTELAEFLPGLWSSIRREVFQ
TASERVESAGLSALSAITSCLSRTVLKSDSGDALQSFLELVIKDCQHHLCEPDLKLVWPS
AKLLQAASGASYRASLIVTSVVLPALLEQYNSRTQCAHRRTLLEVLQGFIQPTVRSQPAE
LEDSVLLPFQKSLSSVVFSALSESNASLQVTATKVLATLGQQSGLLTETDVELAVDHLTR
LVVEEDDAQLSSAVTDCAGSLARLYPAVFASRMVPRLKDVIFTERVSEGDASSRSKAAAR
ERSVTALAFISSQLSLVQESAPVLLQVLATAHKGSSSFSLDDVISVCQSMRMIAGHAQDA
AEIGDFFHDIVIPRLLGLSLHAALHSQTSSGSSTSPLTDEAVLSAIVPVISTACAALQPV
PAGQMAAQAVSLFLDGDVSFLPENAYPSQIELLKSGSECCSQSQLVCLLMASVCSLSQQV
DIPHIDRLLAELEELIFSCTHTFSYTSAAKCFAGLINKRAAGQALDAVLEKTLKRISATL
DCKSSAQRVQAFTLLIWVVKALLLRYHPLSMNLTDKLFCLLSDDQLGSQAADSFSLLMSD
SPDVLNRSCHANVRIMYRQRFFTENSAKLVQGFNCAEREKRSVFLKALSHIVNNLPRQVQ
LTELPALLPLLLEALSCPDEAVQLSTLSCLQPLLMEPPPALTTQLEALFTRLLALTASPD
MKVRITALRCVHALSRLPSHMVLPFRARVLRALAKPLDDKKRLVRKEAVAGRNEWFLLGG
PGGR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcatctgttagctctggtggaggaattcgtgtctggacaagacgacagttcg
gctgcaaatatcgcgacaggtgtcaaggctgaacagttctccatacttcagctggttgag
gcgcttgggttaagtttaacaagctctcagactcagacccgtggccgaggggtgcagctc
ctctctcaggtcctgcaggaatgctacggtggcctttcagagagcgaactcaaggttctg
gtaacgttctacgagaacaggctaaaagatcactatgcaatcacgccacatgttctccat
ggactctcagctctggcgaagtgcacagtgctgcctcctggttcagcagtgtcgatactt
aaagccctcttccaggatgtgcatgtccagtccctgatgttgacggagcggtcctacgcc
tacaagatactcatcagcctgatggactcgagagaagacgagctgaagggtctgggtccg
gactttgtgtttggatttgtgcaggctgtagacggagaacgagatcctcgcaacctcctg
ctggcctttcagatagccagaaacatcatccacagaggttatgacttcaaccagtttaca
gaggagctctttgaagtcacgtcctgctacttccctatagacttcacgcctccgcctaac
gaccctcacggcatcacgcaggaggacctcatcctggctctacgggccgttctaacgggc
acgccacgattcgcagagttcctggtgccattacttatcgagaagattgattcggacgtc
caaaacgccaaggtggactcgctgctcacgctggctgattgtgctcctgtatacggacac
acggagctggccgagttcctcccaggcctctggtcctctatacgcagagaggtgttccag
acggcgagcgagagagtcgagtcggcgggtctgtccgctcttagcgccatcacgtcctgc
ctgtcccgcactgtcctcaagtctgattctggagacgctctgcagtcgttcctggagctc
gtcatcaaagactgtcagcaccatctgtgtgagccggatctaaagctggtgtggcccagt
gctaagctgctgcaggctgcgagtggcgcctcctacagggcgagcctcatcgtaacgtcg
gtggtgctccctgcactgctcgagcagtacaactccagaactcagtgtgctcatcggcgc
actctgttggaggtgttgcaaggtttcattcagcccacggtgaggagccagcctgcggaa
ctagaggacagcgtgctgctccctttccaaaagtctctaagcagcgtggtattttctgct
ctgtctgaatcgaacgcgtctctccaagtcacagctacgaaagttcttgccactctggga
cagcagtcaggcctgttaacggagacggatgttgaactagcagtggatcacctgacgagg
ctcgtcgtggaagaagacgacgcacagctcagctcggcggtaacagactgcgcgggatct
ctggctcgtctctacccggccgtcttcgcttcccgaatggtcccgagactgaaggatgta
atatttacagaacgcgtgtccgagggcgacgcctcgagtcggagcaaagcagcagcccga
gagcgcagcgtgacagcccttgccttcatctcctctcagctcagtctggtgcaggagagc
gcgcccgtactgcttcaggtcttagccaccgcacacaaaggcagcagcagtttctcatta
gacgacgtgatttcggtgtgccagagcatgcggatgattgccgggcacgcccaagacgcg
gcggaaatcggtgacttttttcacgacattgtcattccacgactactcggcctgtctctg
catgcagcgctccatagtcagacgagttctggatcgagcactagtcctctcacagatgag
gcggtgctgtctgctatagttcctgtcataagcactgcttgtgcagcactacagccagta
cctgctggtcaaatggccgcccaggctgtgtccctattcttggatggagacgtgtccttc
ctgccagaaaacgcctacccttcccagattgagctgcttaagagcgggtcagagtgttgc
tcgcagtcacagctggtgtgtttgctcatggcctctgtgtgttccctttcacaacaagtg
gacattcctcatatcgaccgacttctagccgagttggaggagctgatcttctcatgcacc
cacaccttttcctacacatctgcagccaagtgtttcgccggcctgatcaacaagagagca
gcaggccaagccctcgacgcggttctggagaagaccttaaaaagaataagtgcgacgttg
gactgcaaatcctcagcacagcgagtgcaagccttcactttactcatctgggtggtcaag
gctctgctcctgcgctaccatcctctgtctatgaacctaactgacaagctcttctgcctt
ctcagcgatgatcagttaggttcacaggcagcagacagtttctcgctacttatgagcgac
tctccagatgtgctgaaccgcagctgccatgcaaatgtgcgcattatgtaccgccagcgc
ttctttacagagaactctgctaaactcgtacagggcttcaactgcgccgagcgagagaag
agatctgtgtttctgaaggccttgtcacacattgtgaataatctgcccagacaagtgcaa
ctcaccgaacttcctgctttgctgccgctgcttttagaggcgctctcgtgtcctgatgag
gcggtgcagctgtccactctgtcctgccttcagccgctgctcatggaacctccacccgct
ctcaccacacagctggaggcccttttcacccgcctgctcgctctgaccgccagccctgac
atgaaagtgaggattaccgccctgcgctgtgtccacgccctctcccgcctgcctagtcac
atggtgttgcctttccgcgccagggtgctgcgtgctctcgctaagccactagatgacaaa
aagagactggtgaggaaggaggcggtggcaggccggaacgaatggtttttattgggaggt
ccaggaggaaggtga
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