KEGG   Clarias gariepinus (North African catfish): 128540815
Entry
128540815         CDS       T10780                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgar03019]
    128540815 (patl2)
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     128540815 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 128540815
NCBI-ProteinID: XP_053366773
LinkDB
Position
14:1809353..1817322
AA seq 674 aa
MSDSENPEEKGDSVPEAKWPENGDQWSDGEESGLIQEMVEEDEDIDLYNEETFGLDINAE
DLDADPVDLLLLEGNQPSSHHPPSPPEASPPRPKVEIKPQAPASLSEKFRSRRERVGKGQ
LLDDPAVMRTVEGPPSLKSLDSAIVDCGRSSGWGDLNANTWMMSPYGPTRQAPLLQDKAI
VRVIDRSSRGRMPFASPTLRSPLPRTLPQQSPMCPLITRSPLRPQSPFSIKQHYNQPGIY
LSPSTPRFHSPKMMPLQFGPNSPRPGPCFSPLPGSLPQRFRFPVLATQLHPQHKRLLSQR
PQGFRRKPKDWDQYAEIMSAKEKEWIIKLQMIQLQSENPHQDDYYYQEYYRRLETKLAEE
EMLGDRSKREPPKLTTPYVTKTVSYTPVVHIEGSLGQVAVSTCYSPRRAIDAVHGHTVEE
QKDIRQQRLEVLSTIEKCYIILLGVEEAERAKASVSDEEERQRRLKTIQRGVEQISSQLC
NPGSLESAEEFLPCILVAKGKKLLSRLLPFLSSDASLQVLRAITTHLPVLISRDADEALP
VLYPSLRAVISTLTFTQLVSILRDFTTALPDSKDSRLTLACQNKFGLSLLYLLLSQGERL
LTSDVPMEPSIGDFETWTDTVFHVARQLSRSSLIEPLCLPSNLLTLFCRYLDKRTVQQLK
NNMESSTGYLAVGS
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgagtgactctgagaacccggaggagaagggtgactctgttcctgaggctaaatggcct
gaaaacggagatcagtggagtgatggagaagaatctggactcattcaagaaatggtggag
gaggacgaggatattgacctgtacaatgaagagaccttcggattagacataaatgctgaa
gatctggacgcagatcctgtcgatctcctattactggaaggaaaccagccctcctcacac
catcctccatcaccaccggaagcctctcctcccagacctaaagttgaaatcaagccccag
gctcctgcaagcctgagtgaaaagttccgcagccggagggagcgagtcggcaaggggcag
ctgctggatgacccggctgtgatgaggactgtggaaggtccacccagtctcaagagtttg
gacagcgctattgtggactgtggacgcagttcaggctggggggatcttaatgcgaacacg
tggatgatgtcaccttacggcccaacgagacaagcgcccctcttacaggacaaagccatt
gtgcgagtgatcgaccggtcatctcgtggcaggatgccgttcgcctcgcctaccttgcgc
tccccgctgccgaggactctccctcagcaatcgcccatgtgtccgctgataactagatct
ccgttacgtcctcaaagtccattttcaattaaacagcactacaaccagccaggtatttat
ctctcaccttccacaccacgcttccattctcccaaaatgatgcctctccagtttggaccg
aactcgccccggcccggcccctgcttcagccctttgcccggttccctccctcagaggttc
aggttcccagtcctggcgactcaactccatccacagcacaagagactgctgagccagcgt
ccgcaaggctttcggagaaagccaaaggattgggaccaatatgctgagataatgtcggcc
aaagagaaggagtggatcattaagttgcagatgatccaactacaaagcgaaaacccacat
caggatgattattactaccaggaatactatcgaagactggagaccaaattagctgaggaa
gaaatgctgggtgaccgctccaagagggaaccaccaaaactcaccacaccatacgtcact
aaaactgtttcctataccccggtggttcatatcgagggctcgctgggtcaagtcgcagtt
tctacgtgttactcgccacgccgagccatcgacgcggtccatggtcacactgtggaggaa
cagaaagacatcagacagcaaagacttgaggtgctgagcacgattgagaagtgctatatc
attttgttgggggtggaggaagccgagagagcgaaggccagtgtatcggatgaggaggag
cggcagagaaggctaaagaccattcagagaggagtggagcagatcagcagccagctgtgc
aacccaggctctctggagtctgcagaagagttcctaccatgcatcttggttgcaaaaggg
aaaaaactgctgtccagactcctcccatttttatccagtgatgcatctctgcaggttttg
agagcaatcacaacacacctgccggtgctgataagccgagatgcagatgaggcacttcct
gtcctctacccgtctctccgagctgtgatcagcacgctaacgtttacccagctggttagc
attctccgtgacttcaccacagccttacctgactccaaagactcgcgattaacgctggct
tgccaaaataagtttggtctgtcgttgctgtacttgttgctttcgcaaggtgaaagactc
ctgacttctgacgtccccatggagccaagcatcggcgatttcgaaacctggacggatacg
gttttccatgtagcgcggcagctgtcccggtcatccctcatcgagccgctctgcttgccc
tctaacctgctcacgctgttctgtcgttatttggacaaacgcacagtccagcagctcaag
aacaacatggagtcctcaactggctatctggctgtaggttcctga

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