Clarias gariepinus (North African catfish): 128540831
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Entry
128540831 CDS
T10780
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b
KO
K06482
integrin alpha 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04518
Integrin signaling
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128540831 (itga3b)
04518 Integrin signaling
128540831 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128540831 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128540831 (itga3b)
04810 Regulation of actin cytoskeleton
128540831 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128540831 (itga3b)
04515 Cell adhesion molecules [BR:
cgar04515
]
128540831 (itga3b)
04090 CD molecules [BR:
cgar04090
]
128540831 (itga3b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128540831 (itga3b)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128540831 (itga3b)
CD molecules [BR:
cgar04090
]
Proteins
128540831 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
128540831
NCBI-ProteinID:
XP_053366794
LinkDB
All DBs
Position
14:complement(8195065..8244083)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAPGSPLHFCLCVILTAQTCCGFNLDLRFPVIKEGRTKGSLFGFSVAQHRLTQKPRKYLL
LAGAPKDKALSKLKVNETGAIYSCPITTDPADCTRVDFITSTDSSEMIEGMWLGVTVASQ
REHPGGRVLACGHRYVKIVQGGGEEQRRMVGKCFVRGNDLSFDREDLWQDHSYEVCNPNT
DMDMEGMCSMGISAGMTDSDVYIGCTGSFEWQGNVHVTWRDTSPGNSWDYSEKGFEFLNK
RNSYMGYSVTEEMKLLSRKEYTVVTGAPRDDSRGSVTLAVKRSLKLEPVIVIPGEQVGSY
FGSSIAVADLNNDDWNDLIVGAPFYFDRYKEHGGAVYIFMNENGSFQNKSSIILNGEKGS
AFGFAVAAIGDINQDGFQDFAVGAPFHDSGKVYIWTGSKEGITTVPSQVIEGKSLGSGGF
QTFGYSLSGGMDMDGNKYPDILVGSLDDRIALLRARPVIHLSKNFTVEPKIVDPNQCMDP
CITAKMCFTYTMSNGNRNFKKDITVKYTVEADRNRRSPRVQFINGKSTYTGLLSFSSPTC
QELKLRVNEQVSNKLEPIVFLLNVSLSDAEVEPQQTLQDLDAFPMLSGQQQLTEKTEINF
QKECGSDNKCSSNLQVKAQFASEQQSVFPSVDDRQTMEYNSSVKKLVLLVEVSNVPGNNK
PAEDAHQAMLNITVPPTLTYSGFRSKEIECNANKTVLCDLGNPFKGNRKISFQIIFETYI
TLYTDQIVLQLQLSTLSEQTDLFPVPVTLNVENTILTSFSIENSVVNTYFSGEVVGESGM
NSTSDIGSLVEYVFQVNVVGEPLGMLGTLVMDFQWPFEVTNGKWLLYLTEILTGGTSESH
CVPPGQIVNHLNLTLAKKSPKRPKRHLDNSLPLTEAAVTLLTPRKETYLMDCAMQTARCV
TFSCPLRNMSTSASLTIRARVWNSTMLEDFANAFRVTVKGNAMLRLETDKPTIKMKAETR
EFTVNIDPIPGEETPYNVPLWIYIIAGVAGILLLGIISLILWKCGFFKRAVYYKVMPKYH
GVKIRREERYKLSRAFQPEHELNKKLWVTNWTEVQEYYY
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggctccccgctgcacttctgcctgtgtgtgatcctcaccgcgcagacctgc
tgtggatttaacctggacctccgcttccccgtcataaaggaaggaagaaccaaaggcagc
ttgttcgggttctctgtagcgcagcaccggctgacgcagaagcccaggaagtacctactc
ctggcaggtgcacccaaagataaagccttatcaaagctcaaggtaaatgagaccggagcc
atctactcatgccccatcaccacagacccagcggactgcacccgagtcgacttcatcacc
tcaacggattcatccgagatgatagaaggcatgtggcttggagtgaccgtagccagtcaa
cgagagcatcctggtggacgagtattggcatgtggccaccgctatgtgaagatagtgcag
ggcggaggagaggaacagcggcggatggtgggcaaatgcttcgtccggggtaacgacctg
agctttgaccgcgaggacttgtggcaggaccactcgtatgaagtgtgcaaccccaacaca
gacatggacatggaaggcatgtgcagcatgggcatttctgcaggcatgacggacagcgat
gtctacatcggctgcacggggagcttcgaatggcagggcaatgtgcatgttacctggaga
gacaccagcccagggaactcctgggattacagtgaaaaaggctttgaatttttgaacaag
cgcaacagctacatgggctattctgtaacagaagaaatgaagttgttgagcagaaaagag
tacacggtggttacaggggcgccaagagatgactccaggggttcagtgacgctggctgtg
aaaaggtcgttaaagctcgagcctgtgattgtgatcccaggagagcaagtgggctcttac
tttgggagcagtatagcagtggcggatctcaacaatgacgattggaatgacctgatagtg
ggagcgccgttctatttcgaccgctacaaagagcacggcggagcggtgtacattttcatg
aacgaaaacggatctttccagaacaagtccagcatcatcctgaacggtgaaaagggttct
gcgttcggattcgctgtggcagctataggagatataaatcaggatggattccaagatttt
gcagttggcgcaccgttccatgattcaggaaaagtctatatatggacagggagcaaggag
ggaataacgactgttcccagtcaggttattgaagggaagtctttgggatctggtggattc
cagacgttcggctattccctcagcggaggcatggacatggacggcaacaaatatcctgac
atcctagtcggctctctcgatgaccgtatagcactgttgagggcgcgtccagttatccat
ttatccaaaaacttcacagtagagccaaagattgtggatcccaaccagtgcatggaccct
tgtataacagcgaagatgtgtttcacttatacgatgagcaatggaaaccgtaactttaaa
aaggacattactgttaagtacactgtagaggcagaccgcaaccggcgaagcccaagagtg
cagttcatcaatggcaaaagcacatacacaggcctgttgtccttctcatctccaacctgc
caggagctaaagcttcgagtaaatgagcaggtatcaaataaactggagccgattgtgttc
ctcctgaatgtttctctgagcgacgctgaggtggagccccagcagacgctacaggacctc
gatgcattccccatgctcagtggccaacaacagctgacggagaaaaccgagattaacttc
cagaaggagtgtggctccgataacaaatgcagcagcaatctgcaggtgaaggctcagttt
gccagtgagcagcaaagtgtgttccccagcgtggatgatagacagacgatggaatataac
agcagtgtgaagaagctggtgctgttagtggaggtgagcaacgtgcctgggaacaacaag
ccagccgaggacgcacatcaggccatgctcaacatcaccgttccccctacactcacctac
tctggctttcgttccaaggaaatcgagtgtaatgctaacaagactgtactgtgtgatctt
ggaaatccatttaagggcaacagaaagatttcctttcaaattatattcgagacttatatt
acactgtacacagatcagatcgtgctgcagctgcagctgtctactcttagtgaacagacc
gatctctttcctgtcccagtcaccctgaatgtggagaacacaatcctcacctctttctct
atagagaactcagtggtgaacacttactttagtggtgaagtggtgggcgagtccggcatg
aacagcacaagtgacatcggcagtctagtggagtacgtcttccaggtgaacgtggtggga
gaaccattaggaatgttaggaactctggtgatggatttccaatggccgtttgaagtgaca
aacggtaaatggctgctgtatctgacagagatcttaaccggtgggacgtctgagtcgcac
tgcgttcctcccggacaaattgtaaatcatctgaacttaacactggcaaaaaagagtccg
aaacggcctaagcgacacttggacaacagcctgcccctcactgaagcagctgtaaccctt
ctcactccacgcaaagagacctacctgatggactgtgcgatgcagacggctcgctgcgtg
accttctcgtgccccctgaggaacatgtctacttcagcctctctcaccatcagagctcgt
gtgtggaacagcaccatgctggaggatttcgccaatgcctttcgggtgactgtgaaaggg
aacgccatgctgagactggagacagacaaacccaccatcaagatgaaagctgaaactcga
gagtttacggtgaacattgatcccattccaggagaagaaaccccatataatgttccatta
tggatatacatcattgcaggcgtagcaggaatcctcttattaggcatcatcagcctcatc
ctgtggaagtgtgggttctttaaaagagctgtctactacaaggtgatgcctaagtaccat
ggagtgaaaatacgcagggaggagaggtacaagttgagcagggctttccagcccgagcac
gagctcaacaaaaaactctgggtcaccaactggacagaagtgcaagaatattactactga
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integrated database retrieval system
