Clarias gariepinus (North African catfish): 128540931
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Entry
128540931 CDS
T10780
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128540931
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
128540931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_12
TPR_19
TPR_11
TPR_16
TPR_CcmH_CycH
TPR_8
CFAP70_TPR_C
TPR-S
TPR_9
CFAP70_mid_TPR
ANAPC3
TPR_YpiA_C
Motif
Other DBs
NCBI-GeneID:
128540931
NCBI-ProteinID:
XP_053366903
LinkDB
All DBs
Position
14
Genome browser
AA seq
474 aa
AA seq
DB search
MMSSAQDTNLKTRLLQLECHFTWGLNKNDMDLTDLLTRLEEQLNLDLGREAGVARTHSCM
GFVNFLLGSNTKALTDFTRSVELTKSHGNSCEKLLVVVYGDLAWLYYHIGNFAECEIYLN
KLGDIEKKYPVVPYAEVLGEKGWSFFKFSRKYYDRAKGCFNEALKLDPEDAEWNAGLAIL
LYRLQDSEASTAIGQLRRAIATNPNDDVLKVLLGLKLSAQKKRSEYNEAESLVEQALEGS
PEHPHVIRYVGKYFRNQGSVDRSIALLRRALEKVSNTALIHHQLGLCYKKKVIDLKKAGR
YHKRHKEIKHAQGQCIHHLELATEMKTSFIIAMSELALQYGVNRDFLKADELFQNTLQEA
KEKKDNYQSVLLCYAEFEQYRMKCEAAAIKHYTECLKINPKSDEGKRSAKNLIKIANRRI
EHNPKDGEAFGILGIVHKERREKQQAVECFEKALSYADNKDYLSDLSELRLSLQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcagctcaagacacaaatttaaaaaccagacttcttcagctggaatgccat
ttcacttgggggctgaataaaaatgatatggatctcactgatcttctgaccaggctagaa
gaacaacttaacctggaccttggaagggaggcaggagttgcacgcacacacagctgtatg
ggatttgtaaattttctactaggctccaatactaaggcacttaccgactttacgagatct
gtagagctcacaaagtctcatggaaatagctgtgagaagctgcttgttgttgtctatgga
gatcttgcatggttatattatcatataggtaattttgcagagtgtgaaatctacctgaat
aaacttggagacattgaaaagaaatatccagttgttccctatgctgaagtacttggagag
aaagggtggagcttctttaagttttctcgaaaatattatgacagagctaaagggtgcttc
aatgaggccctgaaactggacccagaggatgctgaatggaatgccggccttgcaattctt
ctttaccggctacaagattcagaggcttcaactgcaattggtcaacttagacgggccata
gccactaacccaaatgatgatgttcttaaggtgttacttggcctaaaattgtctgcacaa
aaaaagcgcagtgagtacaatgaggctgaaagtctagtagagcaagccttagaagggtct
ccagaacaccctcatgttattcgatatgttggaaagtatttccgaaatcaaggctctgtg
gacaggtccattgccctcctcagaagagcattagagaaagtttccaatacagctcttata
catcatcagctggggctctgctacaagaaaaaggtaatagatctgaagaaagcagggaga
taccataagagacataaagaaattaagcatgctcaagggcagtgcatccaccacttagag
ttagcaactgaaatgaagaccagctttattattgctatgagtgaactggccttgcagtat
ggggtaaacagagattttttaaaagcagatgaattgttccagaatacattacaggaagct
aaagaaaaaaaagataactaccagtctgttcttctgtgttatgcagaattcgagcagtac
aggatgaaatgtgaggctgctgccatcaaacactacactgaatgtctgaaaataaatcca
aaaagtgatgaagggaagagaagtgctaaaaatctgataaagattgcaaatagacgaatt
gagcacaacccaaaagatggagaagcctttggaatacttggaatcgttcataaggaaaga
agagaaaaacaacaggcagtagagtgctttgagaaagcactgagctatgcagacaacaag
gattaccttagtgatctttctgaacttaggctttcattacagtaa
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