Clarias gariepinus (North African catfish): 128540941
Help
Entry
128540941 CDS
T10780
Symbol
myof
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Others
Ferlins
128540941 (myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128540941
NCBI-ProteinID:
XP_053366927
LinkDB
All DBs
Position
14:10390427..10422637
Genome browser
AA seq
2038 aa
AA seq
DB search
MLRVVVESASGLPKKKLGSPDPITSVVFKGETKKTRSINSELNPVWKETLEFDLKGSSLD
SSSFIDVIVKDFEALGKDKFIGSAKVNLKDLASGQVKSLSSKGLPLVNESGQNIGATIDL
LIGYEPPANTPPNPNDQPDGGAAGTTGADGNEDATDTGGLSSPTQPGQKSLSRTRKQRPL
SNKPQDFQIRVRIIEGRQLPGNNIKPVVKIHVCGETHRTRIKRGNNPFFDEIFFYNVHML
PSELFDQHVSIRVYNSSSLRADSLMGEFKVDVGYIYDEPSHCVMRKWLLLNDPDDSSSGA
KGYLKVSMFIVGTGDEPPVEKRDPDSDNDDVESNLLLPAGIALRWVTLQLKVFRAEDLPQ
MDDSITQSLKEAFGGESNKKNLVDPFIEAWFAGKKLCTKIIEQNANPEWNQVLNLQVKFP
SMCERIKLTTFDWDRLTRNDAIGTTFLNLTSIASSGGEVEVEDPGNVFPGYTGETGESGV
GFLPAFGPSYINLYGSPREFTSLVDPYEDLNFGKGEGAAYRGRILIELSTKLEGKPENDL
EAISNDDILVAQKYQRRRKYCLCAVFHSATMIRDPGEPIQFEVSIGNYGNNLDSTCKPLA
STTQYSCAVFDGNQYYYLPWADTKPVVAVMSFWEDISHRLDAVNIILHIANRLQDNITDL
KTEILAKVPDNKLYEIRTKLLSQLMEDISSFKLPDLEGKPNLTALDIQIKKLRDNTLKNI
LTSAGHLLQMGANITESLPTIDSWLDRLKQLAEEPQNSMPDVVIWMLRGETRVAYSRIPA
HQVLYSVHSEAACGQYCGKTQTICLKYPMDKDKGSKIPVQIRVNMWLGLVAVEKKFNTYA
EGTFTVFAELYENQAKMIGKWGTSGLLNRPKFSDITGKVKLKQEYFMPPVGWQWEGDWFV
DPEKSLLTEADAGHSEFVEEVYENQTRNPGGEWTAAPYTDVNGENARSPEEINCPNGWKW
MDEWTFDEKRAVDERGWEYGITISPDDKPKSWVAAEKTYHVHRRRRKIRPRKKVAAGALA
AEKKDTGHPEGWEFSSLIGWKFHQNERSTDSFRRRRWRRKMEPSDSIGASAIFKLEGALG
IDREAKADDKGSKSDASNLFGANTPNVSCTFDRSYEYHLRVYVYQARNLLALDQDSFSDP
YVHVSFLHMSQTTEIIKSNLSPTWDQTLIFNKVPIFGDPQTIARNPPLVVLEIFDCDQVG
KDELLGRSSCLPLVKLNPVMDISPKLLWYPVINKEVAAGQILVSAELILRNKGNETELPL
VPPKRGDMLFMVPQGVRPVVQLTMIEILAWGLRNMKTYQLAPVTSPSLVVECGGERIQSA
VIRNMKKSPNFPGSVLQLKVLLPKDEMYTPPIVLKVIDHRPFGRKPVVGQCTIDSLEEYR
CDPYSTVAEVAMSSKVALMARTSQDLRINMEERPLLETQQEKEKEEIDWWSKFYASIGEH
EKCGPYLEKGYDTLKVFNCELENMTEYKGLTDFCNTFKLLRGKTDTGEDDPSVVGEFKGS
FKLYPLSDDPAVPLPPQQFRELPDSGPQECIVRIYVIRAVDLQPKDNNGLCDPYIKIALG
RKTIDDRDNYIPNTVNPVFGRMFEMSCFLPQDKDLKISLYDFDLLTRDEKVGETVIDLEN
RLLSRFGSYCGLPQTYCISGPNQWRDQWKPSQILQHHARLKGVPPPRSEDNGNTLSFNGR
EYQLSNFEANKEIHQHLGPASERIALHVLRTQGLVPEHVETRTLYSTFQPTLPQGSLQMW
VDVFPKSLGPPGPPFDITPRKAKKHMLRVIIWNTTNVILDETSITGEKMSDIYVKGWMAG
KEEDKQKTDVHYRSLDGDGNFNWRFVFDFDYLPAEQLCLVSKKEHFWSLDKTEFRIPPQL
VIQIWDNDKFSLDDYLGTVELNLNNLISPAKIPEKCSLQMLDNVPKTTHKFDKSKSLFAQ
KTVKGWWPCYIEKDGKKELGGKVEMTLEIVNETEADERPAGKGRDEPNMNPKLNAPNRPE
TSFFWFTNPCKTLKFIVWRRFKWLFIGLILLLLVLLFLGILLYSLPNYISMKIVQPIK
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgttgtggttgagtctgcttcaggtcttcctaaaaagaaactcggcagtccg
gaccccatcacatctgtggtgtttaaaggtgaaacaaagaaaactcggtccatcaacagt
gaacttaatcctgtctggaaagagacacttgaatttgaccttaagggttcctctcttgat
tcctcatccttcattgatgtgattgtaaaagactttgaggctcttggaaaagacaagttt
attggctctgcaaaagtcaacttaaaagacctagcaagtggtcaagtgaagtcgctctct
tcaaaaggtttgcctttagttaatgaaagcgggcaaaatattggagccacaatcgacctt
ttgattggttatgaacctccagctaacactcctccaaacccaaatgatcaaccagatggc
ggtgcggcaggaaccaccggtgctgatggaaatgaagatgccactgatacagggggttta
tcatctcccactcagccaggtcaaaaatctctatcacggaccagaaaacagaggccttta
tctaacaaaccgcaggacttccagatccgggtccggatcatcgaaggtcggcagttgcct
ggaaacaacataaagcctgttgtgaaaatacatgtttgtggagaaacccacaggactcgc
atcaaaagaggaaataaccccttctttgatgagattttcttctacaacgtccacatgttg
ccatcagagcttttcgatcaacacgtcagcattcgggtgtacaactcctcatcactgagg
gctgacagtcttatgggagaatttaaggttgatgttggttacatctacgacgaaccttct
cactgtgtcatgaggaaatggctgcttttaaatgacccagatgactcaagctctggggca
aagggttacctgaaagtcagcatgttcatcgttgggaccggggatgagcctccggtggag
aagagggacccagatagcgataatgatgatgtagaaagcaaccttctgctaccagctgga
attgcactgagatgggttacgctgcagctcaaagtgtttcgtgctgaggacctccctcaa
atggatgactccatcactcagtctttgaaagaggcatttggaggagaaagcaataaaaag
aatctagtagatccattcattgaggcctggtttgctggaaagaagctttgcacaaaaata
attgagcagaatgcaaaccctgaatggaatcaggttcttaatctacaggttaagtttcca
tctatgtgtgaacggattaaactgacaacattcgattgggatcgcctcacaagaaatgat
gccataggaactacattcttgaatctgacctcaatagcatcatctggtggtgaagttgaa
gtggaggatccaggaaatgtgtttccaggatatacaggagaaactggggagtctggcgtt
ggctttctgcctgcatttggcccaagctacattaacctgtatggcagcccaagggagttt
acaagtttagttgatccttatgaagaccttaactttggaaagggggaaggggcagcctac
agaggacgcattctcattgagctttccactaagcttgaaggaaagccggagaatgactta
gaggccatatcaaatgatgacattttggttgctcagaaataccagcggaggagaaagtac
tgcctgtgtgctgtgttccacagtgccaccatgatccgagaccctggagagcctattcag
tttgaagttagcattggcaattatggcaacaatctagactcgacatgcaaacctctcgct
tcaaccacccaatacagctgtgccgtgtttgatggtaatcagtactactacttgccctgg
gctgacacaaaacctgttgttgccgttatgtcattttgggaggatatcagtcatcgctta
gacgctgttaacatcattctccacattgcaaaccgtttgcaagacaacatcactgatctg
aaaacagaaatactagccaaagtcccagacaataaactgtatgagattcggaccaagctt
ttaagccaactcatggaggacatcagcagcttcaaactcccagacctggagggtaaacct
aacctcacagccctggacatccagattaagaagctcagagacaacaccttaaagaatatc
ctgacttcagctgggcacttgttacagatgggagctaacataacagagagtttgcccacc
attgacagctggctggacagacttaaacaactagctgaggagccccagaacagcatgcct
gatgttgttatctggatgttgaggggagagacacgggtggcctacagtcgcattccagct
catcaagttctatattcggtgcacagcgaggcagcatgtggccagtactgtggaaaaact
cagaccatctgtctaaagtacccaatggataaagacaagggttccaagatccctgtacaa
atacgggtgaatatgtggctgggattagtcgcagtcgagaaaaagtttaatacttatgcc
gagggaacatttactgtttttgcagaactgtatgagaaccaggcaaaaatgataggcaag
tggggtacttcgggtcttttgaatcgcccgaagttctccgacataaccggaaaagtgaag
ctaaagcaggagtattttatgccccctgtaggctggcagtgggaaggtgactggtttgtg
gatcctgagaaaagtttgctgactgaggctgatgcaggacacagtgagtttgtggaagaa
gtttatgagaatcagactcgtaatcctggaggagagtggacagcagcgccgtatacagat
gtgaatggagaaaacgctcgttccccagaagagataaattgccccaatggatggaaatgg
atggatgagtggacctttgatgaaaaaagggcagtggatgagagaggttgggaatatggc
attaccatttctcctgatgataagcctaagtcatgggtggcagctgagaaaacgtaccat
gtccatcgccgtagaagaaaaatccgaccacgcaaaaaggtggctgctggtgcattagct
gctgagaagaaagatacaggacatccagaaggttgggagttttcttctctcattggatgg
aagttccatcaaaatgagcgctccactgattcgttccgtcgccgccgctggagaaggaag
atggaaccttctgacagcattggagcgtcagccatctttaaactagagggggcactggga
attgatagagaagcaaaagcggatgacaagggatcaaaatcagatgccagtaacttgttt
ggagccaatacacctaatgtgtcatgtacttttgaccgatcctatgaataccacctacgg
gtttatgtttaccaggccagaaacctgcttgccttggatcaagacagtttctcagatcca
tatgtgcatgtgtcattcttacacatgagccagaccacagaaataatcaagtccaacttg
agcccgacctgggatcaaactcttatcttcaacaaagtgccaatctttggagatccccaa
accattgctcgcaatccacctctagttgttttggagatatttgactgtgaccaagtgggc
aaagacgagctgttgggcagaagtagctgcctgcctttagtgaaactgaacccagtcatg
gatatatctcctaagcttctctggtaccccgtcataaacaaggaagtggctgctggacaa
atcctggtttctgctgaacttattttaagaaacaagggaaatgagactgaacttcccctt
gtcccaccaaagagaggagacatgctgttcatggtgcctcagggggttcgtcctgtagtg
cagctcactatgatagagattctggcatgggggttgcgcaacatgaagacctaccagttg
gcacctgtgacctccccgagcttggtggtggagtgtggaggcgagcggattcagtcagca
gtcatcagaaacatgaaaaagagccccaacttccctggaagtgttctacagttgaaagtg
ctcttgcccaaggacgagatgtacacacctccaattgtgctgaaagttattgatcatagg
ccatttgggaggaagcctgtagtaggtcagtgcactattgactcactggaagagtacaga
tgtgacccgtatagcactgtggctgaagtggctatgtcatcgaaagtggctttgatggca
aggacttcccaggatctgcgcatcaacatggaggaaaggcctcttcttgaaacacagcaa
gagaaggagaaagaggagattgattggtggagtaagttttatgcttcaattggagaacat
gagaaatgtggcccataccttgagaaaggatatgacacccttaaggtcttcaactgtgaa
cttgaaaacatgactgaatataaggggttgactgatttctgtaacactttcaaactcttg
cgtggaaagacagacaccggtgaggacgatccctctgtggtcggggagtttaagggatcc
ttcaagctctacccgctctcagatgacccggccgtacccttacctccacagcagttcaga
gaacttcctgacagtggccctcaggagtgtatcgtcaggatctacgtgatcagagcagtt
gacctgcaacccaaagacaacaatggtttatgtgatccatacattaagatcgcactagga
aggaagaccattgatgatagagacaattacataccgaatactgtgaacccagtgtttgga
agaatgtttgaaatgtcatgcttcttgccacaagacaaagatctgaagatctccctttat
gactttgatcttcttactcgcgatgagaaagtaggcgagacagtgattgacctggagaat
cggttactttctcgcttcggatcttactgtggtctgccacagacttattgcatatctggg
ccaaatcagtggagagatcagtggaagccatcacagattcttcagcaccatgcacgtctg
aagggcgtgcctcctcctagatctgaggacaacgggaacaccttaagttttaatggccgg
gaatatcagctctctaactttgaggctaacaaagaaattcatcaacacctgggcccagcg
agtgagcggatcgcactgcatgttcttagaacacaaggcctcgttccagagcatgtggaa
accagaacactttacagcaccttccagcccacgctgccgcagggaagtcttcaaatgtgg
gtcgatgttttccccaaaagtcttggacctcctggacctccttttgatattaccccacgc
aaggccaaaaaacatatgttgcgtgtcatcatttggaacaccacaaatgtcattttggat
gaaaccagcatcactggagagaaaatgagtgacatatatgtaaaagggtggatggcggga
aaagaagaggacaagcaaaagactgatgttcattacagatctcttgatggtgatggaaat
ttcaactggagatttgtctttgactttgattaccttcctgctgagcaactgtgtctggtt
tctaaaaaggaacacttttggagtcttgacaaaacagaattccgaattccacctcagctg
gtcattcagatatgggacaatgataaattctcgctggatgattatcttggcacagttgaa
ctgaatctgaacaacctcatctcccccgctaaaatacctgagaagtgcagcctgcaaatg
ctggataatgtgcctaaaacaactcataagtttgacaagtccaagtctcttttcgcccag
aagacagtcaaaggatggtggccctgctacattgaaaaagacggaaagaaggagctcggt
gggaaagtggagatgacactggagatagtcaatgagacggaggcagatgaaaggccagca
ggaaaaggcagagatgaacccaacatgaatccaaagctcaacgcacccaaccgacctgaa
acatccttcttctggttcacaaacccatgcaaaaccttgaagttcatcgtatggcggagg
ttcaagtggctttttattggcttgattttattgctgttagttttactgttccttggaatc
cttttgtattcattaccgaactatatctcaatgaaaattgtgcagccaattaagtga
DBGET
integrated database retrieval system
