Clarias gariepinus (North African catfish): 128540961
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Entry
128540961 CDS
T10780
Symbol
itgb3b
Name
(RefSeq) integrin beta-3b
KO
K06493
integrin beta 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03266
Virion - Herpesvirus
cgar04081
Hormone signaling
cgar04145
Phagosome
cgar04148
Efferocytosis
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
128540961 (itgb3b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
128540961 (itgb3b)
04512 ECM-receptor interaction
128540961 (itgb3b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128540961 (itgb3b)
04148 Efferocytosis
128540961 (itgb3b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128540961 (itgb3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128540961 (itgb3b)
04810 Regulation of actin cytoskeleton
128540961 (itgb3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128540961 (itgb3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128540961 (itgb3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128540961 (itgb3b)
04515 Cell adhesion molecules [BR:
cgar04515
]
128540961 (itgb3b)
04090 CD molecules [BR:
cgar04090
]
128540961 (itgb3b)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128540961 (itgb3b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128540961 (itgb3b)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin beta subunits
128540961 (itgb3b)
CD molecules [BR:
cgar04090
]
Proteins
128540961 (itgb3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
128540961
NCBI-ProteinID:
XP_053366974
LinkDB
All DBs
Position
14:27178481..27205354
Genome browser
AA seq
788 aa
AA seq
DB search
MAKTPTLRIYYLILLYLISDQVYGSNICTSRGASTCQQCLAVHHSCAWCFQEDFGLNGPG
ASRCDLKENLLNAGCTAEELEYPISQMTVTEDRPLSDKASGSTTDVTQIQPQKLHISLRP
DDSRTFTLQVRQVADYPVDLYYLMDLSYSMNDDLTQLRKLGNGLAEEMSKTTSNLRMGFG
AFVDKPISPYMYISPPEAVRNPCYSIPYKCQPQFGYRHVLSLTEEVNRFTEEVKKQKVSR
NRDAPEGGFDAILQAAVCNEKIGWRPGASHLLVFTTDAKTHVALDGRLAGIVQPNDGQCH
MDADNVYAMSTIMDYPSLALITEKMSENNINLIFAVTSPVLLLYKNYSDLIPGTVVGTLS
QDSRNVIQLIQDAYAKLRSKVELELLNVPEELSLSFNATCLNNEFIPGLKSCSGLKRGDQ
VSFSVEVRARGCPKEKTKTFTIKPVGFKDTLQITVDFECECKCQAQGQRNSSMCHHGNGT
YECGICLCHAGRLGPRCECAEGDYSLSEQETCSGPNKVICSGRGDCVCGQCVCHNNDFGK
VWGKRCDCDDFSCLRYKGELCSGHGTCSCGFCQCYPDWSGENCNCSTRTDTCMSSLGLLC
SGRGQCMCGSCECTQPGAYGSTCDKCPTCPDACTMKKDCVECKHFQRGRLFEDESCARIC
RDEIKLVDDLVLHDKNAVNCTYKDENDCVQRFQYYEENSGKSILSVVKEPDCPKGPDIMV
VLLFVAGAVLILGLVSLLIWKLLVTIHDRREFAKFEEERARAKWETGHNPLYKGATSTFM
NITYRGKE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaccgacgttacggatttattatctcatcttactgtatttaatttcagac
caggtgtatggctctaatatctgcacatctcggggagccagcacgtgtcagcagtgttta
gcagtgcaccattcctgtgcctggtgcttccaagaggattttgggttgaatgggccagga
gcatcacgttgtgatttaaaggagaacctgctaaatgcaggatgcacagcagaagaactg
gagtatcccatcagccagatgactgttacggaggacagacctcttagcgacaaggcctcg
gggtccaccactgacgtgacacagatccaaccacagaaactgcacatcagcctaagacct
gatgactcgcggacatttacgctgcaggtgaggcaggtcgcagactaccctgtagatctg
tactatctgatggacttgtcctactccatgaatgatgacctgacccagctgaggaagcta
ggaaatggactggcggaggagatgagcaaaaccaccagtaacttgcggatgggtttcggg
gctttcgtggataaaccgatctcaccatatatgtacatctctccaccagaagctgtgagg
aatccatgttactcgataccatacaaatgccagccccagtttggctaccgccatgttctg
tctttgacggaagaagtgaaccgcttcactgaagaagtaaagaagcagaaggtatctcgg
aacagagatgcccctgaaggaggctttgatgccatcctccaggcagctgtatgcaatgag
aagattggttggcgtccaggtgcttcacaccttcttgtgtttaccacagatgccaagact
catgtagcactggatggacgcctggctggcatcgtgcagcctaatgatggccagtgtcac
atggacgcagacaatgtatacgccatgtccactataatggactacccatctctcgcattg
atcacggagaaaatgtcagagaacaacataaaccttatttttgctgtgaccagcccagta
cttttactttataagaattacagtgatctgatacccggtactgtggtggggacgctgtct
caggactcacgcaatgtgatccagctaatccaagatgcctatgctaaacttcgatccaag
gttgagcttgagctcctgaacgttcctgaagaattgagcttgtccttcaatgccacgtgt
ttaaacaacgagttcatccccgggctaaagtcttgctctggactcaagagaggagaccaa
gtttctttcagcgttgaggtacgtgctagaggatgcccaaaggagaagaccaaaactttc
accattaaaccagtgggcttcaaagacacactccagatcactgttgactttgagtgtgag
tgtaagtgtcaggctcaggggcagcgcaacagctctatgtgtcaccacggcaacggcacc
tacgaatgtggcatctgcttgtgccatgcaggaagattgggcccgaggtgtgagtgtgct
gagggtgattacagcctgagcgagcaggaaacatgcagcggccctaacaaagtgatctgc
agcgggcgtggagactgtgtgtgtggtcagtgtgtgtgtcacaacaacgattttggaaag
gtctgggggaagaggtgcgactgtgacgacttcagctgtctgcgttataaaggggagctg
tgctctggtcatggcacgtgctcgtgcggtttctgccaatgttacccggactggtcgggg
gaaaactgcaactgctccacccgcacagatacctgcatgtccagcctggggttgctgtgt
agtggccgtggacagtgtatgtgtggaagctgtgagtgtactcagcctggggcatatggc
tctacctgtgataagtgtcccacctgccctgacgcctgcactatgaaaaaagattgtgtg
gagtgtaaacattttcaaagaggcaggctcttcgaggacgaaagctgtgcccgaatttgc
agagacgagattaagctggtcgatgatctagttttgcatgataagaacgctgtgaactgc
acctacaaggacgagaacgattgtgtccagaggttccaatactatgaggagaacagtgga
aagtccattctgtctgtagtgaaagagccagactgccctaagggccctgacatcatggtc
gttcttctcttcgttgccggagctgtactaattctaggtctcgtctccctacttatctgg
aagctgctggtgacgattcacgaccgccgtgagtttgctaaatttgaggaggagcgagca
cgagccaagtgggaaacgggtcacaatcctctctacaaaggtgctacttctaccttcatg
aacattacctatcgaggaaaggagtga
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