Clarias gariepinus (North African catfish): 128540967
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Entry
128540967 CDS
T10780
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128540967 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128540967 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128540967 (srsf2a)
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
SR proteins
128540967 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
128540967
NCBI-ProteinID:
XP_053366983
LinkDB
All DBs
Position
14:27256334..27259943
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AA seq
221 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGGPPRRYGGYGRRSRSR
SPRRKRGHSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSHSKSRTPRRRKSKSPSRSRSRS
KSKSPSRSRSPRSNRASKSKSRSRSRSRPKSPEANGTAQES
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggtaggcctccgcccgacgtcgagggcatgacctcgctgaaagtggacaac
ctgacttatcggacttcgcccgagacgcttcggcgcgttttcgagaagtacggtcgcgtc
ggagacgtgtacatcccgagagaccggtacacgaaggaaagccgcgggttcgcctttgtg
cgctttcacgacaagcgggacgccgaggacgcgatggacgccatggacggcgcgctgctg
gacgggcgcgagctgcgcgtgcaaatggcgcgctacggaagaccgccggactcgcactat
ggccgccgcgggggaccgcctcgcagatacggcggatacggacggaggagccgcagtcgc
agtccccggcgtaagagaggacacagccgatcccgaagcaggagccgctctcgatcccga
agcaggtctcgttacagccggtccagatccaggtcctactctcggtctcgctcccactcc
aagagccgcactccccgcaggaggaagtctaagtccccttccaggtcccgatccagatct
aagtccaagtctccgtctaggagtcgcagtccccgctcgaacagagcgtccaaatccaag
tcgaggtcccggtccaggagcagacccaaatctcccgaggccaacggaaccgcacaggag
tcgtga
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