Clarias gariepinus (North African catfish): 128541047
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Entry
128541047 CDS
T10780
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128541047
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
128541047
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Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
TPR_8
TPR_19
TPR_10
TPR_14
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_7
TPR_Slam
TPR-S
TPR_20
ANAPC3
TPR_NPHP3
HAT_Syf1_M
HEAT_2
Motif
Other DBs
NCBI-GeneID:
128541047
NCBI-ProteinID:
XP_053367112
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All DBs
Position
2:40803872..40807224
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AA seq
474 aa
AA seq
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MSSHQSTNLKARVLQLECHFTWGLNKNDRDLKDLLTRLEEQLNLTLGGETGVARTYSHMG
FVKFLLGSNTEALSYFERSVELTKSHGDDCYKLLVVAYGDLAWLHYHMGSFAECESYLNK
LSNIKEKYPIVPYAEVLGEKGWTFLKFSRKYYKWAKVCFSEALKLDPDDSEWNAGLAIVL
HRTEPTFQDTPNSTAINQLRWAIDTNPDDDVLKIYLAIRLLGQNQYKEAESLVEKALERS
PEHPHVLRYVENYFQGQGSVDRSIALLTKTLEKVSSKAFIHHQLALCFKKKIINLKKSGR
QHLEKEEILHSQEQCINHLKTAVELNPYFVIAMSELALQYGQSGDVYKAEQMFQNAFEAA
KTIRDNYQSVLLCYAEFQQYCMRCEPAALKHYIECLKINPNSYKGKRCAENLTKIAKRRI
RNDPQDGEAFGILGIVHKEKGKKQQAIKYFEKALSYVDNEDYLSDLSELKISLQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacaccaaagcacaaatttaaaagccagagttcttcagttggaatgccatttc
acttggggactgaataaaaatgatagagatctcaaagatcttctgaccaggctagaagaa
cagcttaacctgactcttggaggagagacaggagttgcacgtacatacagccatatggga
tttgtaaagtttctactaggctccaatactgaggcacttagctactttgagagatcggta
gagctcaccaagtctcatggagatgactgttacaagctgcttgttgttgcctatggagac
cttgcatggttacattatcacatgggtagttttgcagagtgtgaaagctacctgaataaa
ctgagtaatattaaagaaaaatatcccattgttccatatgctgaagtgcttggagagaag
gggtggactttccttaaattttcgcgcaaatattataaatgggctaaagtctgcttcagt
gaggccttgaaactggaccctgatgacagtgaatggaatgctggccttgcaattgttctt
catcggacagagcctacattccaagatacaccaaattcaactgcaattaatcaacttaga
tgggccatagacactaacccagatgatgatgttcttaagatatatcttgctataaggttg
ttaggacaaaaccagtacaaggaggcagagagcctagtagagaaagccttagagcggtca
ccagaacaccctcatgtgctacgatatgttgaaaactatttccagggtcaaggcagtgtg
gacaggtccattgccctgctaacgaaaacattagagaaagtgtctagcaaagcttttata
catcatcagctggcactctgctttaagaaaaagatcataaatctgaaaaaatcaggaagg
caacacttagaaaaggaagaaattttgcattctcaagagcaatgcatcaaccacttaaag
acagcagttgaattgaatccttactttgttattgctatgagtgagctggcccttcagtat
ggacagagtggggatgtgtataaagcagaacaaatgttccagaatgcatttgaggcagct
aaaactataagagataactaccagtccgttcttctgtgttatgcagaattccagcaatac
tgtatgagatgtgagcctgctgccctcaaacactacattgaatgtctgaaaataaatcca
aattcatataaagggaagaggtgtgctgaaaacctaacaaagattgcaaagagaagaatt
aggaatgacccacaagatggagaagcctttggaatacttggaatcgttcataaggaaaaa
ggaaaaaaacaacaagccataaagtactttgagaaagcactaagctatgtagacaatgag
gattacctcagtgatctttctgaacttaagatttcattacagtaa
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