Clarias gariepinus (North African catfish): 128541056
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Entry
128541056 CDS
T10780
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128541056 (arid5b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
ARID
128541056 (arid5b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
128541056
NCBI-ProteinID:
XP_053367125
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Position
14:9763502..9856894
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AA seq
1159 aa
AA seq
DB search
MEPNSLTWVGSPCGLHGPYIFYKAFRFKLEAKARILSLGDFFFVRCKPEDPVCIAELQLL
WEERTTKQLLSSSKLYFLPEDTPQGRTVTHGEDEVIAVSEKVIVKLEDLVKWTVWDASCW
NKGLHALPLKPSMLKELGKNGQRESLYRYRESTLNSGLNFKDVLREKAELGEDGEDKRVL
VLSYPQYCRYRSIIARLRERPASLLTDQVVLALGGIATLTSNTQILYCRDTFEHPTLLEN
DSICDEFAPNLKGRPRKKKVSMCQRRDSQAQSGNAKEPGSVEARTPSKVKAEAKALVSKP
KTSSKKVLAEEKAKEETGEECRAEEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMF
QAAQKLGGYELITARRQWKNVYDELGGNPGSTSAATCTRRHYERLILPYERHTKGEEDKP
LPPIKPRKQEASTQEGGTKSKVPSTKRHKDEQNPKGWNEKDVSAKAPDLCAEDLKDKEPL
QEEVMVKQEAQQSQVPAQIDGEAASPTTEDGDVQLILNEEEEKKPVLKKSWDGGPHEAIK
HASLPQDSMPLKSEDSEVFPIAASMPLRHSHPIPNCYTQDQWQHGTTEYNAPPYNLGKTE
QTGIKDSQNHVGMVLPTLKQRPLHPLSVPEIPTERAELPTKEESFCYNPLLYPRGNPGIM
SPLAKKKMLSQVSGTGLANSYPYGPPPPLVNKKTSSSSPEETTSEQTGTQVPTSTAEAGV
VIKRPSVIQHAQSFKPRSSEDRRPAVETLHREVCGEREIYPSDQSQHQPLHQQQPSPSGE
TFIMRNTLHSGEKSSEVPRPGQVPFLGDFCSSPHLHSLYRQTEHHLSKEQLSKYLNREVY
PRDCETAHGYPQSPLGEKVTEEQPTDLSLPKPSSHKLSHSTSSLCNLSHSMMQQDIKNTP
LFQAGSTQSSNLDYHPRACRVPPMTVSTPKKVVEPQLKAHSGRGEETVSYKIDELARPIL
STKSSPQNVGAARPLKRNLEELENGPTEKKIRAVTPLHCSTPRDVSVKVRTPEPDNESMK
PAEPAHAPHINSYAAEGHKFPMHSSIFPGLYPGAFVSQVQEMCDSLGPHAPPGYSHPLQY
LKNQAVISPLMPQFAIHSIMMQRQFLAQAASPAHLYRHPMGTSYGDILHHGLYPMTALNP
QPAFSPPQLSSVHPSTKLS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcacgtgggtcggctcaccttgtggcttgcacggaccgtacatt
ttctacaaggcgtttcggttcaagctcgaagccaaagcgagaattttgtctctcggcgat
ttcttcttcgtacgctgtaaaccggaggacccggtgtgcatagccgagctccagctgctc
tgggaagaaaggacaaccaagcaacttttatccagctccaaactttattttctgccagaa
gatactccccagggaaggactgtcactcacggagaggacgaggtgatagctgtgtctgag
aaggtcatcgtgaagttggaagacttggtgaagtggacagtgtgggatgcatcatgctgg
aacaagggcttgcacgcactgcctctaaagccatcgatgctcaaagagctgggcaagaac
ggccagagggaaagcctctaccgctaccgagagtccacgctcaacagcggcctcaacttc
aaggacgtcctgagggagaaagctgaactgggtgaagatggggaagataagagggtcctg
gtgctaagctatccacagtactgtcgctaccgctccatcatcgcacggctccgcgagcgg
cctgcctcactcctgacggaccaggtggtactagctctggggggtatcgctacgctcaca
agcaacactcagattctctactgcagggacacatttgagcaccctactctgctggagaac
gacagcatctgcgacgaatttgcacccaatttgaagggccggccccggaaaaagaaagtc
tccatgtgccagcgcagagactcgcaggcccagagtggaaatgccaaagagcccggcagt
gtggaggccagaacacccagcaaggtgaaagcagaagcaaaagccttggtgtcgaaacct
aagaccagctccaaaaaggtactagccgaggagaaggccaaggaggagacaggggaggag
tgccgtgccgaagagcaggccttcctagttgctctctacaagtacatgaaagaaagaaag
acccctattgagcgaataccctatctagggttcaagcagataaacctttggacgatgttt
caagctgctcagaagctgggaggatacgagctgatcacagcacgccgacagtggaaaaat
gtatatgacgagttgggtgggaacccaggaagcaccagtgctgccacgtgcacgcggaga
cactacgagagactaatcttgccctatgagagacatacaaaaggagaggaagacaagcca
ctaccccccatcaaacccagaaagcaagaggccagcacccaggaggggggcaccaagtca
aaggtgccatccacaaaacgccacaaagacgaacagaatccaaagggctggaatgaaaag
gacgtctcggctaaagcccccgatctgtgtgcagaggacctaaaggacaaggagccgctt
caggaagaagtgatggtgaagcaagaggcacagcagtcccaggttccagcgcagatagat
ggcgaggcagcaagtcccaccaccgaggatggggatgtgcagttgattctcaatgaggag
gaggagaagaaaccagtcctcaagaaatcctgggatggtggtccacatgaagcaatcaaa
catgcatcacttccacaggatagcatgcctctcaaatctgaggactctgaggtgtttccc
attgctgcatctatgccactacggcactctcaccccattcccaactgttacacacaggac
caatggcagcatgggacaacagaatacaatgcacctccatacaacctgggaaagacagaa
cagactggtataaaagacagccagaaccatgtaggaatggtgctacctaccttgaagcaa
agacctttgcatcctctctcagtaccagagatacctaccgagagggctgaactcccaacc
aaggaggaaagcttctgctacaatcccctcttgtatcctaggggcaaccctggtataatg
tcccccctagcaaagaagaagatgctgtcacaagtaagtggcactggtttggccaacagt
tacccctatggtccacctcccccattagtcaacaaaaagacatcaagcagtagtccagaa
gaaaccacttctgagcaaacaggcacccaggttcctacctctaccgctgaggcaggtgtc
gttattaagcgcccgtctgtcattcagcatgctcagagtttcaagcctcgcagcagtgag
gacagaagacctgctgttgaaaccttacatagagaggtgtgtggtgagagggaaatatat
ccttctgatcaatcccagcatcagcctttacaccagcaacagcctagcccatcgggagag
acctttattatgagaaacactcttcactctggggagaaatccagtgaggtacctcgccct
ggtcaggtgccttttctgggtgatttctgctcctcaccacacctgcacagtctctaccgg
caaacagagcaccatctaagcaaggaacagctaagcaagtacctaaacagagaggtttac
ccacgggactgtgaaactgcacatggttaccctcaaagccctcttggtgaaaaggtgaca
gaggagcaaccaacagatctgagcctcccaaaaccctcttcacacaaactgtcccactcc
acctcatctttgtgcaacctgtcacattccatgatgcagcaggacattaaaaacactcct
ctttttcaggcaggtagcactcaaagttcaaacttggactatcaccccagagcttgtcgt
gttcctccaatgactgtgtctactccaaaaaaggtggttgaaccccagcttaaagcacac
agtggccgaggagaagagacggtaagctacaagatagatgaactggctcggcctatccta
agcaccaaaagtagcccgcaaaatgttggtgcggcacggccgcttaaacggaatctagag
gagttggagaatggacccacagagaaaaagattcgggctgtgacccccttgcactgctcc
acccctagagatgtctcagtgaaagtgcggaccccagagcctgacaatgaatccatgaag
ccggctgagccggcacacgcgccgcatatcaacagctacgctgccgagggacacaagttc
ccaatgcactcctccatcttcccaggactgtatcctggggcatttgtatctcaggttcag
gaaatgtgtgacagcctgggccctcatgccccccctggttattcacatcccctgcagtac
ttgaagaaccaggctgtcatttcaccactcatgccccagttcgccatccattccataatg
atgcagagacagttcttggcccaggcggccagtccagcccacctgtacaggcatccaatg
gggacttcatatggagacattcttcatcatggcctttaccccatgacagccctcaatccc
cagcctgctttcagtcccccacagctctcctcagttcatcccagcaccaaactttcttag
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