KEGG   Clarias gariepinus (North African catfish): 128541147
Entry
128541147         CDS       T10780                                 
Symbol
vclb
Name
(RefSeq) vinculin b
  KO
K05700  vinculin
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04510  Focal adhesion
cgar04517  IgSF CAM signaling
cgar04518  Integrin signaling
cgar04519  Cadherin signaling
cgar04520  Adherens junction
cgar04810  Regulation of actin cytoskeleton
cgar04820  Cytoskeleton in muscle cells
cgar05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    128541147 (vclb)
   04518 Integrin signaling
    128541147 (vclb)
   04519 Cadherin signaling
    128541147 (vclb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128541147 (vclb)
   04520 Adherens junction
    128541147 (vclb)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128541147 (vclb)
   04810 Regulation of actin cytoskeleton
    128541147 (vclb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    128541147 (vclb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgar04812]
    128541147 (vclb)
   04147 Exosome [BR:cgar04147]
    128541147 (vclb)
Cytoskeleton proteins [BR:cgar04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     128541147 (vclb)
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128541147 (vclb)
SSDB
Motif
Pfam: Vinculin Talin_IBS2B Talin_R4 Mob_Pre
Other DBs
NCBI-GeneID: 128541147
NCBI-ProteinID: XP_053367361
LinkDB
Position
14
AA seq 1067 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLCAPVAAVQAAVSNLVRVGKE
TVQTTEDAIMRRDMPPAFIKVENACTKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTAQSAGVDEAVKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTETMKRALALIDSKLAQAKNWLKDPSAQPGEAGEQAIR
QILDEAGKVGELCVGNERKVILDTAKTLGHLTDQVADLRSRGSGTSPVAIQKAQQVAQGL
DVLSGKVANAADKLEAVTNAKQTLAKKAEAAQSWLADPASGPEGEEHVKAVLAEAQKIAA
LCEDPREYDDILRNVNEIAALTAKLSQLRKAGKGDTPEARALAKQISTALQNLQSKTNRA
VANMCPAKAAVHLEGKMEQAQRWIDNPGTEDGGVGQAAIRGLVAEGRRLANVLPGSQRAE
LMGKCEQVEQLMGQLAELSARGQADTPQAHTLAQQLQHALRDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPPGTPHREEVFEERAGGFENHAARLGATAEKAAAVGTANRGTVEG
IHAAVKSARDLTPQVVSAARILLKNPGNQAAHEHFETMKNQWIDNVEKMTTLVDEAIDTK
SLLDASEEAIKHDLEKCHMAMTNHQPQMLVAGATSIARRANRIVLVAKREVENSEEPKFT
ETLREAANELSASISPMVMGAKSVANNIQDPNLQKGFMDSGYRILASVAKVREALQPQEP
EFPPPPPPDLQQLSIHDEGAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQRAGEMVSEPMM
VAARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTQLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq 3204 nt   +upstreamnt  +downstreamnt
atgccggtgttccacaccaagaccatcgagagcatcctggagcccgtggcccagcagatc
tctcacctggtcatcatgcacgaggagggggaggtggacgggaaggcgatcccggacctg
tgcgctccggtggcggccgtgcaggcggcagtcagtaacctggtccgggtggggaaggag
acggtgcagactacggaggacgccatcatgaggagagacatgcctcctgcattcataaag
gtggagaatgcgtgcactaagctggtccaggcagctcagatgctgaaggccgacccgtac
tccgtccccgcgcgggattatctcatcgatggctctcgcggcattctgtcaggaacatct
gacctgctgctcaccttcgatgaggctgaggtgcgtaaaatcatccgagtgtgtaaaggc
atcctggagtacctgaccgtcgctgaggtggtggagagcatggaggatctgatcacctac
accaagaacctcggaccaggtatgactaagatggctaagatgattgacgagcggcaacag
gagctgactcaccaggagcaccgcgtcatgctcgtcaactccatgaacaccgtgaaggag
ctgctgcccgtcctgatctcaggaattaagatctttgtgacgacgaagacggctcagagt
gcaggtgtggacgaggcggtgaagaacaggaacttcactgtggagaagatgagcgctgag
atcaacgagatcatccgagtgctgcagctcacatcctgggatgaagacgcctgggccagc
aaggacacggagaccatgaagcgagctctggcgctcatcgactccaaactggctcaggcg
aagaactggctgaaggatcccagcgcacagcctggagaggctggagaacaggccatcagg
cagatcctggatgaagcagggaaggtgggtgagctgtgtgtggggaacgagaggaaagtg
attctggacacggccaagaccctgggacacctgactgaccaggtggcagacctgcgctca
aggggttctggtaccagtcctgtggccattcagaaggctcagcaggtcgctcaggggctg
gacgtgctctccgggaaagtagcgaacgcagcggataaactggaggccgtgaccaacgct
aaacaaacactcgccaagaaagcagaggcagcacagtcctggctagctgaccccgcctcc
ggccctgagggggaggagcatgtaaaggcggttctcgccgaggctcagaaaatcgcggcg
ctgtgtgaggatccgcgtgaatacgacgacatcctgcgcaacgtcaatgaaatcgccgct
ctcaccgccaaactctctcagctccgcaaagcgggtaaaggtgatacccctgaggctcgt
gccctggccaagcagatctccaccgctctacagaacctgcagtcgaagacgaaccgcgcc
gtagcgaacatgtgtccggctaaagcggcggtgcacctggagggcaagatggagcaggcg
cagcgctggatcgacaaccctggcaccgaggacgggggagtgggtcaggctgcgatccgt
gggctggttgccgaggggcgtcgccttgccaacgtgttacctggctcccagagggcggag
cttatggggaagtgtgagcaggtggagcagctgatggggcaactggccgagctgagcgcc
cgggggcaggctgatacaccacaggcacacacactcgctcagcagctgcaacacgcgctc
agagaccttaaaggtaagatgcaggaggccatgacacaggaagtgtccgacatcttcagt
gacacgaccacgcccataaagctgctggctgtggctgcgaccgctccaccaggcactccc
caccgagaggaggtgtttgaggagcgagcgggcgggttcgagaatcacgcggcgagactc
ggggccactgcagagaaagcggcggcggtggggacggccaatcgcggcacggtcgaggga
atccacgctgccgtcaagtccgccagggacctcacacctcaggtggtgtctgctgcccgc
atcctgctgaagaaccccgggaaccaggccgctcatgagcacttcgagaccatgaagaac
cagtggatcgacaatgttgagaaaatgaccactctggtggatgaagcgatagacaccaag
tctctgctggacgcgtcagaggaggccattaaacacgacctggagaagtgtcacatggcc
atgaccaatcaccagccccagatgctggttgccggggcgacgagcatagcgcgcagggct
aatcgcatcgtgctggtggcgaagcgggaagtggagaactccgaggagcccaagttcaca
gagacgctgcgggaggcggccaacgagctcagcgcctccatatcgcccatggtgatgggg
gccaagagtgtggccaacaacatacaggacccgaatctacagaaaggctttatggactcg
ggttacagaattttggcgtcagtagctaaagtgcgtgaagcgctccagcctcaggagccc
gagttccctcctcctcctcctcccgacctccagcagctcagcattcacgatgagggcgcc
cccccgaagccccccctgcctgagggtgaagtcccgcccccacggccgccgcctcccgag
gagaaggacgaggagttccctgagcagagagccggggagatggtcagcgagcccatgatg
gtggcggcgcgacaactccacgacgaggcccgcaagtggtccagcaagggtaatgacatc
atcggcgcggcgaagcgtatggccctgttgatggctgaaatgtctcgtctggtgcgaggc
ggaagcgggaacaagcgcgctctcatccagtgcgctaaagacatcgccaaggcctcagac
gaggtgacgcagctcgctaaagaggtggccaagcagtgcacggataaacgcatccgaacc
aacctgctgcaggtgtgtgagcgtatccccaccatcagcactcagctgaagatcctctcc
actgtcaaggccaccatgttgggacgcaccaacatcagtgaggaggagtccgagcaggcg
acagagatgttggtccacaacgctcagaacctgatgcagtcggtgaaggagacggtgcgc
gaggccgaggctgcgtccatcaagatccgcacggacgccggcttcacactgcactgggtc
cgaaagaccccctggtaccagtga

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