Clarias gariepinus (North African catfish): 128541197
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Entry
128541197 CDS
T10780
Symbol
pax2b
Name
(RefSeq) paired box protein Pax-2b
KO
K15608
paired box protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128541197 (pax2b)
04131 Membrane trafficking [BR:
cgar04131
]
128541197 (pax2b)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128541197 (pax2b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128541197 (pax2b)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
128541197 (pax2b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128541197 (pax2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
Homeodomain
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
128541197
NCBI-ProteinID:
XP_053367467
LinkDB
All DBs
Position
14:complement(25160029..25182005)
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AA seq
386 aa
AA seq
DB search
MDIHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRHNPTMFAWEIRDRLLAE
GICDNDTVPSVSSINRIIRTKVQQQYHPSPDGTSLSTPGHTIVPSTASPPVSSGSSDPVG
SYSINGILGIPRSNGEKRKRDDDGSEGSGQNSDSQGSVESLRKHLRADAFTQQQLEALDR
VFERPAYPDVFSSSEHIKPEQTSEYALPALNPGLDEVKPSLSSSSSSDLGASVSQSYPVG
RDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYTHPQYTAYNEAWRFSNPA
LLSSPYYYSASRASAPPAAAAAYDRH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctccgccatgcaccggcatggcggagtgaac
cagctgggcggcgtgttcgtgaacggcaggccgctaccggacgtcgtgcggcagagaatc
gtggagctcgcgcatcagggagtgagaccgtgcgacatatcgcgacaattgagggtcagt
cacggatgcgtcagcaagatcctgggcaggtactatgagactggcagtataaagcccgga
gtgatcgggggctccaaaccgaaagtggccactccaaaagttgtggataaaatagcggac
tataagagacacaatcccacgatgttcgcgtgggagatccgggaccgactgctggcggag
ggcatctgcgacaacgacaccgtgcccagcgtctcctccatcaacaggattatccgcact
aaagttcaacaacagtaccacccctctcctgatggaacatctctctcaacaccaggacac
actatagtccctagcacagcttcccctccagtatcgagcggatccagtgatcctgtgggc
tcatactctatcaatggtattcttggcatccctcgctccaatggagagaagaggaaaaga
gatgatgatggttctgagggttcagggcagaacagtgactcccagggcagtgtcgaaagc
ctgaggaaacatctacgtgctgatgcctttacacaacaacagctggaggccttggatcga
gtgtttgagcgaccggcctaccctgacgtcttctctagctcagagcacatcaaaccagaa
cagactagtgagtatgcccttcccgcactaaacccaggactggatgaggtgaaacccagc
ctgtcgtccagcagttcttcagacctgggtgccagcgtgtcccaaagctaccctgtaggt
agagatatggccaacacaaccttacctgggtatcctcctcacgtcccccctacaggacag
ggcagctacccaacatccacactggcaggaatggttcctgggagcgaattttcagggaat
ccctacactcacccacagtatacagcatacaacgaggcctggcgcttcagcaaccctgct
ctactgagttccccttattattatagtgcatcccgagcctctgcaccaccagctgctgcc
gctgcttacgaccgccactag
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