Clarias gariepinus (North African catfish): 128541260
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Entry
128541260 CDS
T10780
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128541260 (grin2cb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128541260 (grin2cb)
04082 Neuroactive ligand signaling
128541260 (grin2cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128541260 (grin2cb)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128541260 (grin2cb)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
128541260
NCBI-ProteinID:
XP_053367577
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All DBs
Position
14:complement(18220142..18242421)
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AA seq
1330 aa
AA seq
DB search
MAIHQGCLSLSLQLLLLLTAMPHYQTRPFFGPPTVNVAVVFSSSGHQGEIKGRLSRENFL
DLPLDVNPITVLVNDTSPSALLTRLCQTMAAESLHGVVFEDNVESEAVAQILDFLSSQTS
IPIIGINGGSALVIPDKAEGSTFLQMGASIEQQVNTMFKVMEEYNWDSFVVITSHYPGYE
NFVDYIRFFTDSSYFLWELQDVLSFEMSVGANDIRSRRLLQQVDAQVYLVYCSHEEAQYL
FRMASDVGLLGPGYIWVIPSLAVGNPEAAPPDSFPIGVIGIISDHWRKTLRQRVREGVAV
VVQGVYSFHKHKGIVPEAHSQCNSSAKSYDHYSLFRHMLNVTWEHRDLSFNAHGYLANPS
MVIIALDRERLWDKVGSYEAGILHMRYPVWPRYSSFLEPVSDNRHLTVATLEERPFVIVE
SVDPSTGTCVRNTVPCRRQANRTEVGIGHSEPYTKLCCKGFCIDILKKLSRTIKFSYDLY
LVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVA
RSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYFSPVGYNRSLVNAKEPGGPT
FTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQY
IDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHSHMTKYNQKGVEEALN
SLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLA
LLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWE
HLLYWKIRHCVHKSDRLDFLLAISRGIYSCFNGVEDMGKSGNLQNLDITANYAQANMLKM
LQTAKDIVSSAKVENSLDKATKTIENWSRKGGSLPARIPQVTTTETLPGHLSYVINIPEN
HSSLVQRSLTPQFTQHYDENSSPPHGSTQRLISQPNPLHYTIPSRSSGLYNGLLPMSSIS
TPHLATYDLHSQTSAKTAPRFISHKDLQAPDIFAEHQEPYHTILGHRYKKRSQSCLEESV
DLRGLHDNKSHNACSAEANHLAHDVHPSSMESPYRPGDIPCNSCIRTYAGPGLDGMPLIG
KRKIHRRPSFLKATWGPGRVRFPNERPFDPASCRVDMPDLFPFTEAYGRGRNNKYHPLPV
EHIYLHSYRRHQRKGQKLRHSQSTYLPSYREAVHHDAIGMRRASSFVHRQYSYPDIPAYQ
SPLPYGPAELCNIFPCIGHPSDTGYRGYRAPVHLQDGHLLPVPGSRVLYRVGSPGVPMTW
RRISSLESEV
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggccattcaccaggggtgtttgagtctctctctccagctcctcctgttgcttactgcc
atgccacactaccagactcgtcctttctttggcccacctacagttaacgtggcagtagtg
ttcagcagctctggccaccagggtgaaataaagggccgtctgagccgtgagaacttcctg
gacctgccactggatgtaaaccccatcactgtgctagtaaatgacacaagccctagtgcg
ctgcttacacgcctctgccagaccatggctgctgaaagcctccatggtgtggtgttcgag
gataatgttgagtcagaggctgtagctcagatcctagactttctctcctcccagacttct
atacccattattggcatcaatggaggctcggccttagttatccctgacaaggctgaaggt
tcgactttcctccagatgggagcttccattgagcagcaagtaaatacgatgtttaaagta
atggaggaatacaattgggacagctttgtggtgatcaccagtcattatccaggctatgaa
aactttgtggactacatccgctttttcaccgactccagctactttctttgggagttacaa
gacgtgctgagctttgagatgtcagtgggagccaatgacattcgctcacgccgactgcta
caacaggtggatgctcaggtgtatctggtgtactgctcacatgaggaggctcagtacctc
ttcaggatggcatcagatgttggactcttgggacccgggtacatttgggtcattcccagc
ctggcagtaggaaacccagaggctgcacctccagatagttttccgattggggtcatcggc
attatttcagaccactggcggaaaactctgcgccaaagagtgagggaaggtgttgctgtt
gtggtgcagggggtgtatagtttccacaagcataaggggattgtaccagaagctcacagt
cagtgcaacagttcagcaaaatcatatgaccactattcactttttagacatatgctaaat
gtgacatgggagcacagagatttgtccttcaatgcacatggctatcttgcaaatccctcc
atggtgatcattgcgttggaccgagaaagactctgggacaaggtagggagctacgaggca
ggaattttgcacatgcgctaccctgtttggcctcggtatagcagcttcttggagcctgtg
tctgataaccgacacctgacagtggccacactggaggagagaccctttgtcattgtggaa
agtgttgatccaagcacagggacatgtgtaagaaacaccgtgccatgccgtcgccaggct
aacaggactgaagttggtattggtcattcagagccatacaccaaactgtgctgcaaaggc
ttctgcatcgacattctcaaaaagctctcgcgcaccatcaagttctcctatgatctctac
ttggtcaccaacggaaaacatggaaagctggtccgaggcatctggaatgggatgataggc
gaggtcttctacaagcgtgcagatatggctattggctcactcactattaatgaggagcgc
tcggagatcattgacttttcagtgccatttgtggagactgggattagtgtcatggtagct
aggagcaatggcactgtctccccatctgcttttctagagccttacagtccagcagtctgg
gtcatgatgtttgttatgtgcctaactgttgtggctgtaacagtgttcatctttgagtat
tttagtcctgttggatacaaccgaagcctagtcaatgccaaagaacctggaggacccacg
ttcactattgggaagtcagtttggctcctatggggaattgtctttaataactctgtccct
atagaaaatcctaaaggaacaaccagcaagattatggtgctagtttgggctttctttgct
gtcatctttctagcaagctacactgcaaatttagctgccttcatgattcaagaacagtat
attgacactgtgtctgggctcagtgacaaaaagtttcagaagccccaggagcattacccc
ccgttccgcttcggcacggtcccaaatggcagcactgaaagaaatattcgcagcaattat
ccagacatgcacagccacatgaccaaatacaaccagaagggagtggaagaggcactcaac
agtctcaaaacagggaagttggatgcctttatatatgatgctgcagtgcttaattacatg
gctggcaaggacgagggctgcaagctggtgaccattggcagtgggaaggtgtttgctaca
acagggtatggcattgctctgcagaaggactcccgctggaaacgccccatagacctggca
ctcctccagttcctgggagatggggacacacagaggctggaaactgtatggctgtctggt
atatgtcagaatgagaagaatgaggtgatgagttccaagttggacatagacaacatggca
ggtgtcttctacatgctactagttgctatgggtcttagtctgcttgtctttgcctgggaa
catctgctttattggaaaatcagacactgcgtccacaaatctgaccgtctagacttcctc
ttggccataagcaggggaatttacagctgctttaatggtgttgaagacatgggaaaatct
ggaaacttacagaatcttgatatcacagcaaactatgctcaggctaacatgcttaaaatg
cttcagacagccaaagacattgtatcttcagcaaaggtggagaattctttggacaaggca
acaaaaaccattgagaactggagccgaaaaggtgggagtttaccagcacgcattccacag
gtgaccaccactgagacactcccaggtcacctctcttacgttattaatattccagaaaac
cactcgtcccttgtgcagcgctctttaacaccgcagtttacacagcattatgatgaaaac
tccagtccaccacatggatctactcaaagattgatttcacaaccaaatccactacactac
actataccttccagatcaagtggcctatataatgggctacttcccatgtctagcattagc
actcctcatttagcaacatatgatctgcattctcaaacatcagccaaaacggcccctcgt
tttatctcacacaaagatctacaggcaccagacatttttgctgagcatcaggaaccatac
cacaccattctaggccacagatataaaaagagatcacaaagttgtctggaggagtcagtg
gatcttagaggattacacgataacaaaagccacaatgcatgttccgcagaagcaaaccat
ttggcacatgatgtacatccttcgtctatggaaagcccttatcgaccaggagacattcca
tgtaattcatgcattaggacatatgcaggtcctgggttagatggcatgcctttaatagga
aaaagaaaaatccatcgcagaccctccttccttaaagccacctggggcccaggcagggtg
cggtttccaaatgaaaggccttttgacccagcctcatgtcgagtggacatgccagatctc
tttccttttacagaagcatatggaagagggagaaataacaaataccaccctttgcctgtg
gaacacatttaccttcactcataccgccgccatcaaagaaagggtcaaaagttaaggcac
tcccagtccacctatctgccctcttacagggaagcagtacatcatgatgccataggtatg
aggagggcctccagctttgtacacagacaatactcctaccctgacattccagcttaccag
agcccactgccatatggaccagctgagctgtgcaacatcttcccctgcataggccaccca
agtgacactgggtatagggggtatagggctcctgtacaccttcaagatggccatctgctc
cctgttccaggcagtagggtgctttacagggtcggctccccaggtgtacctatgacatgg
agaaggatctctagtctggagtcggaggtttga
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