Clarias gariepinus (North African catfish): 128541275
Help
Entry
128541275 CDS
T10780
Name
(RefSeq) myoferlin-like
KO
K22125
myoferlin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Others
Ferlins
128541275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128541275
NCBI-ProteinID:
XP_053367599
LinkDB
All DBs
Position
14:10298633..10342792
Genome browser
AA seq
1803 aa
AA seq
DB search
MLRVVVESASGLPKKKLGSPGPITSVVFKGKTKKTRAINSKLDPDWNETLKFDLKGSSLD
SSSFIDVIVKDFEALGKDKFIGSAKVNLKDLASGKVKSLPSKGLPLVNENGQNIGATIDL
LIGYEPPANTPPNPNDQPDGGVAGTTGADGNEDATDTGGLSSPTQLDQKSLSRTRKQRPL
SNKPQDFQIRVRIIKGRQLPGNNIKPVVKIHVCGETHRTRIKRGNNPFFDEIFFYNVHML
PSELFNQHVSIRVYNSSSLRADSLMGEFKVDVGYIYDEPSHCVMRKWLLLNVPDDSSFGA
KGYLKVSMFIVGTGDEPPVEKRDPDSDNDDVESNLLLPAGIAPRWVTLQLKVFRAEDLPQ
MDDSIAQSLKEAFGGKSNKKNLVDPFIKAWFAGKKLCTKIIEQNANPEWNQVLNLQVKFP
SMCERIKLTTFDWDRLTRNDAIGTTFLNLTSIASSGGEVEGEIGESGGGFLPAFGPSYIN
LYGSSRKFTSLMDPYEDLNFGKGEGAAYRGRILIELSTKLEGKQENDLEAISNDDILVAE
KYQWKRRYCLCAVFHSATMIRDPGEPIQFEVSIGNYGNTLDSTCKPLVSTTQYSCAVFDG
NQYYYLPWADTKPVVAIMSFWEDISHRLDAVNIILHIANRLQDNITDLKTEILAKVPDNK
LYEIRTTLLSQLMEDISSFKLPDLKGKPNLTALDIQIKKLRDNTLKNILTSAEHLLQMGA
NITESLPTIDGWLDRLKQLAEEPQNSMPDVVIWMLRGKKRVAYSRIPAHQVLYSEHSEAA
CGQYCGKTQTIFLKYPMDKNKGSKIPVQIRVNMWLGLGTVKTKFNVYAKGTFTVFAELYE
NQAKMIGKWGTSGLLNRPKFSDVTGKVNLKQEYFMPPVGWHWEGDWFVDPEKSLLTEADA
GHSEFVEEVYENQTRNPGGEWTAAPYTDVNGENARSSEEIECPRGWKWMDLYAEIFDCDQ
VGKDELLGRSSCLPLVKLNPAMDISPKLLWYPVINKEVPAGQILVSAELILRNKGNETKL
PLVPPKRGDMLFMVPQGVRPVVQLTMIEIRAWGLRNMKTYQLAPVTSPSLVVECGGERIQ
SAVIRNMKKSPNFPGSVLQLKVLLPQEEMYTPPIVLKVIDHRTFGRKPVVGQCTIDSLEE
YRCDPYSAVAEVAMSSKVALMARTSQDLRINMEERPLLETQEKEEIDWWSKFYASNGEHE
KCGPYLEKGYDTLKVFNCELENMTEYKGLTDFCNTFKLLRGKTDTGEDDPSVVGEFKGSF
KLYPLSDDPAVPLPPPQFRELPDSGPQECIVRIYVIRAVDLQPKDNNGLCDPYIKIALGR
KTIDDRDNYIPNTVNPVFGRMFEMSCFLPQEKDLTISLYDFDLLTRDEKVGETVIDLENR
LLSRFGSYCGLPQTYCISGPNQWRDQWKPSQILQHHARLKGVPPPRSEDNGNTLSFNGRE
YQLSDFEANKEIHQHLGPASERIALHVLRTQGLVPEHVKTRTLYSTFQPMLQQKCKNALP
AQGSLQMWVDVFPKSLGPPGPPFDITPRKAKKHMLRVIIWNTTNVILDETSITGEKMSDI
YVKGWMAGKEEDQQKTDVHYRSLDGDGNFNWRFVFDFDYLPAEQLCLVSKKDHFWSLDKT
EFRIPPQLVIQIWDNDKFSLDDHLGTVELNLNNLISPAKIPKNCSLQMLDNVPKTTHKSK
SLFAQKTVKGWWPCYIEKDGKKELGGKVEMTLEIVNETEADERPAGKGRNDPNMNPKLNA
PNRPETSFFWFINPCKTLKFIIWRRFKWLFIGLIILLLVLLFLGILLYSLPNYISMKIVQ
PIR
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgttgtggttgagtctgcttcaggtcttcctaaaaagaaacttggcagtccg
ggccccatcacatctgtggtgtttaaaggtaaaacaaagaaaactcgggccatcaacagt
aaacttgatcctgactggaatgagacacttaaatttgacctaaagggttcctctcttgat
tcctcatccttcattgatgtgattgtaaaagactttgaggctcttggaaaagacaagttt
attggctctgcaaaagtcaacttaaaagacctagcaagtggtaaagtgaagtcgctccct
tcaaaaggtttgcctttagttaatgaaaacgggcaaaatattggagccacaatcgatctt
ctaattggttatgagcctccagctaacactcctccaaacccaaatgatcaaccagatggc
ggtgtggcaggaaccaccggtgctgatggaaatgaagatgccactgatacagggggttta
tcatctcccactcagctggatcaaaaatctctatcacggaccagaaaacagaggccttta
tctaacaaaccgcaggacttccagatccgggtccggatcatcaaaggtcggcagttgcct
ggaaacaacataaagcctgttgtgaaaatacatgtttgtggagaaacccacaggactcgc
atcaaaagaggaaataaccccttctttgatgagattttcttctacaacgtccacatgttg
ccatcagagcttttcaatcaacacgtcagcattcgggtgtacaactcctcatcactgagg
gctgacagtcttatgggagaatttaaggttgatgttggttacatctacgacgaaccttct
cactgtgtcatgaggaaatggctgcttttaaacgtcccagatgactcaagctttggcgca
aagggttacctgaaagtcagcatgttcatcgttgggaccggggatgagcctccggtggag
aagagggacccagacagcgataacgatgacgtagaaagcaaccttctgctgccggctgga
attgcaccgagatgggttacgctgcagctcaaagtgtttcgtgctgaggacctccctcaa
atggatgactccatcgctcagtctttgaaagaggcttttggaggaaaaagcaataaaaag
aatctagtagatccattcatcaaggcctggtttgctggaaagaagctatgcacaaaaata
attgagcagaatgcaaaccctgaatggaatcaggttcttaatctacaggttaagtttcca
tctatgtgtgaacggattaaactgacaacattcgattgggatcgcctcacaagaaatgat
gccataggcactacgttcttgaatctgacctcaatagcatcatctggtggtgaagttgaa
ggagaaattggggagtctggcggtggctttctgcctgcatttggcccaagctacattaac
ctgtatggcagctcaaggaagtttacaagtttaatggatccttatgaagaccttaacttt
ggaaagggggaaggggcagcctacagaggacgcattctaattgagctttccactaagctt
gagggaaagcaggagaatgacttagaggccatatcaaatgatgacattttggttgctgag
aaataccagtggaagaggaggtactgcctatgtgctgtgttccacagtgccaccatgatc
cgagaccctggagagcctattcagtttgaagttagcattggcaactatggcaacactctg
gactcgacatgcaaacctctcgtttcaaccacccaatacagctgtgccgtgtttgatggt
aatcagtactactacttgccctgggctgacacaaaacctgttgttgccatcatgtcattt
tgggaagatatcagtcatcgcttagacgctgttaacatcattctccacattgcaaaccgt
ttgcaagacaacatcactgatctaaaaacagaaatactagccaaagtcccagacaataaa
ctgtatgagattcggaccacgcttttaagccaactcatggaggacatcagcagcttcaaa
ctcccagacctgaagggtaaacctaacctcacagccctggacatccagattaagaagctc
agagacaacaccttgaagaacatcctgacttcagctgagcacttgttacagatgggcgct
aacataacagagagtttgcccaccattgacggctggctggacagacttaaacaactagct
gaggagccccagaacagcatgcctgatgttgttatctggatgttgaggggaaagaaacgg
gtggcctacagtcgcattccagctcatcaagttctatattcggagcacagcgaggcagca
tgtggccagtactgtggaaaaactcagaccatctttctaaagtacccaatggataaaaac
aagggttccaagatccctgtacaaatacgggtgaatatgtggctgggattaggcacagtc
aaaacaaagttcaatgtttatgccaagggaacatttactgtttttgcagaactgtatgag
aaccaggcaaaaatgataggcaagtggggtacttcgggtcttttgaatcgcccaaagttc
tctgacgtaaccggaaaagtgaatctaaagcaggagtattttatgccccctgtaggctgg
cattgggaaggtgactggtttgtggatcctgagaaaagtttgctgaccgaggctgatgca
ggacacagtgagtttgtggaagaagtttatgagaatcagactcgtaatcctggaggagag
tggacagcagcgccgtatacagatgtgaatggagagaacgctcgttcctcagaggagata
gagtgccctcgtggatggaaatggatggatctatatgcagagatatttgactgtgaccaa
gtgggcaaagacgagctgttgggcagaagtagctgcctgcctttagtgaaactgaaccca
gccatggatatatctcctaagcttctctggtaccccgtcataaacaaggaagtgcctgct
ggacaaatcctggtttccgccgaactcattttaaggaacaagggaaatgagactaaactt
ccccttgtcccaccaaagagaggagacatgctgttcatggtgcctcagggggttcgtcct
gtagtgcagctcactatgatagagattcgggcatggggattgcgcaacatgaagacctac
cagttggcacctgtgacctccccgagcttggtggtggagtgtggaggcgagcggattcag
tcagcagtcatcaggaacatgaaaaagagccccaacttccctggaagtgttctacagttg
aaagtgcttttgccccaggaggagatgtacacacctccaattgtgctgaaagttattgat
cataggacatttgggcggaagcctgtagtaggtcagtgcactattgactcactggaagag
tacagatgtgacccgtatagcgctgtggctgaagtggctatgtcatcgaaagtggctttg
atggcaaggacttcccaggatctgcgcatcaacatggaggaaaggcctcttcttgaaaca
caggagaaagaggagattgattggtggagtaagttttatgcttcaaatggagaacatgag
aaatgtggcccataccttgagaaaggatatgacacccttaaggttttcaactgtgaactt
gaaaacatgactgaatataaggggttgactgatttctgtaacacttttaaactcttgcgc
ggaaagacagacaccggtgaggacgatccctctgtggtcggagaatttaagggatccttc
aagctctacccgctctcagatgacccggccgtacccttacctccaccgcagtttagagaa
cttcctgacagtggccctcaggagtgtatcgtcaggatctacgtgatcagagcagttgac
ctgcaacccaaagacaacaatggtttatgtgatccatacattaagatcgcactaggaagg
aagaccattgatgatagagacaattacataccgaatactgtgaacccagtgtttggaaga
atgtttgagatgtcatgcttcctcccacaagaaaaagatctgacgatctccctttatgac
tttgatcttcttactcgtgatgagaaagtaggcgagacagtgattgacctggagaatcgg
ttactttctcgcttcggatcttactgtggtctgccacagacttattgcatatctgggcca
aatcagtggagagatcagtggaagccatcacagattcttcagcaccatgcacgtctgaag
ggcgtgcctcctcctagatctgaggacaacgggaacaccttaagttttaatggccgggaa
tatcagctctctgactttgaggctaacaaagaaattcatcaacacctgggcccagcaagt
gagcggatcgcactgcatgttcttagaacacaaggcctcgttccagagcatgtgaaaacc
agaacactttacagcaccttccagcccatgctgcaacaaaaatgcaaaaatgcccttcct
gcacagggaagtcttcaaatgtgggtcgatgtttttcccaaaagtcttggacctcctgga
cctccttttgatattaccccacgcaaggccaaaaaacatatgttgcgtgtcatcatttgg
aacaccactaatgtcattttggatgaaaccagcatcactggagagaaaatgagtgacata
tatgtaaaagggtggatggcaggaaaagaagaggatcagcaaaagactgatgttcattac
agatctcttgatggtgatggaaatttcaactggagatttgtctttgactttgattacctt
cctgctgagcaactgtgtctggtttctaaaaaggaccacttttggagtcttgacaaaaca
gaattccgaattccacctcagctggttattcagatatgggacaatgataaattctccctg
gatgatcatcttggcaccgttgaactcaatctgaacaacctcatctcccctgctaaaata
cctaagaattgcagcctgcaaatgctggataatgtgcctaaaacaactcataagtccaag
tctcttttcgcccagaagacagtcaaaggatggtggccctgctacatcgaaaaagacgga
aagaaggagctcggtgggaaagtggaaatgacattggagatagtcaatgagacggaggca
gatgaaaggccagcaggaaagggcagaaatgaccccaacatgaatccaaagctcaacgca
cccaaccgacctgaaacatccttcttctggttcataaacccatgcaaaaccttgaagttc
attatatggcggaggttcaagtggctttttattggcttgattatattgctgttagtttta
ctgttccttggaatccttttgtattcattaccgaactatatctcaatgaaaatcgtgcag
ccaattaggtga
DBGET
integrated database retrieval system
