KEGG   Clarias gariepinus (North African catfish): 128541292
Entry
128541292         CDS       T10780                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1-like isoform X1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04010  MAPK signaling pathway
cgar04145  Phagosome
cgar04148  Efferocytosis
cgar04310  Wnt signaling pathway
cgar04370  VEGF signaling pathway
cgar04510  Focal adhesion
cgar04520  Adherens junction
cgar04530  Tight junction
cgar04620  Toll-like receptor signaling pathway
cgar04810  Regulation of actin cytoskeleton
cgar05100  Bacterial invasion of epithelial cells
cgar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128541292
   04310 Wnt signaling pathway
    128541292
   04370 VEGF signaling pathway
    128541292
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128541292
   04148 Efferocytosis
    128541292
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128541292
   04520 Adherens junction
    128541292
   04530 Tight junction
    128541292
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128541292
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128541292
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128541292
   05100 Bacterial invasion of epithelial cells
    128541292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgar04131]
    128541292
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgar04147]
    128541292
   04031 GTP-binding proteins [BR:cgar04031]
    128541292
Membrane trafficking [BR:cgar04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    128541292
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    128541292
  Macropinocytosis
   Ras GTPases
    128541292
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    128541292
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128541292
  Exosomal proteins of other body fluids (saliva and urine)
   128541292
  Exosomal proteins of colorectal cancer cells
   128541292
  Exosomal proteins of bladder cancer cells
   128541292
GTP-binding proteins [BR:cgar04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    128541292
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 128541292
NCBI-ProteinID: XP_053367620
LinkDB
Position
14:10461883..10470916
AA seq 202 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTVPRREQTQCRDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPI
ILVGTKIDLREDKDTVEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFD
EAIRAVLCPPPVPKPKPRCLLL
NT seq 609 nt   +upstreamnt  +downstreamnt
atgcaggccataaagtgtgtggttgtaggagacggggcagttggtaaaacatgccttttg
atcagctacaccaccaacgccttccccggagagtacatccccacagtgtttgataactat
tctgcgaatgtgatggtagatgggaagccagtgaatctggggctgtgggacacagcagga
caggaggactatgacagactcaggcctctgtcctaccctcaaacggtaccacgccgagag
caaactcagtgcagagatgtgtttttaatctgcttctcactggtgagccctgcttcgttc
gagaacgtccgcgccaaatggtacccagaggtccggcatcactgcccgaacaccccaatc
attctcgttggaaccaagattgacttaagagaagacaaggacactgttgagaagctgaaa
gaaaagaaactgactcccattacttacccacaaggccttgctatggctaaagaaataggt
gccgtgaaatatctggaatgttcagccttgactcagcgtggccttaagacagtgttcgat
gaagccatccgtgcagtcttgtgtccaccaccagttccaaaaccaaagccaagatgcctt
ctcctctaa

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