Clarias gariepinus (North African catfish): 128541308
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Entry
128541308 CDS
T10780
Symbol
rhobtb1
Name
(RefSeq) rho-related BTB domain-containing protein 1 isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128541308 (rhobtb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128541308 (rhobtb1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cgar04031
]
128541308 (rhobtb1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128541308 (rhobtb1)
GTP-binding proteins [BR:
cgar04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
128541308 (rhobtb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
128541308
NCBI-ProteinID:
XP_053367634
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All DBs
Position
14:9673822..9689886
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AA seq
687 aa
AA seq
DB search
MDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQE
VLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLYHVKTMWYL
EIKHFCPRTPVILVGCQLDLRYADLDAVNRARRPLARPIKPGDILPPERGREVAKELGIP
YYETSVFDQFGIKDIFDNAIRAALISRRHLQFWKSHLRRVQKPLLQAPFLPPKAPPPLIK
IPDCPRNNPEGPRKLLENPFCADVMFIVQEHFNVFAHKIYLSTSSSKFYDLFQMDLSEEF
QCMVATQYNKREHLMRTLSLDTDEAMAVLPNLSPSSLRASKSDGTLKVKNVNAKHHHNQL
SLALWCKAFQSIHKETVVIPGTGTAAVMTVVKMDNSFQLGPFRAVLRFLYTGELNEREMD
LMKIAQIAEILEVFDLRMMVENIMNKEGFMNKEITKAFHVRKANRIKECLAKSSFTDVVF
RLDDGTINAHKPLLISSCDWMAALFGGSFIESANNEVSFPNTSRVCMQAVLEYLYTNQLS
PMADLDPMELIALANRLCLPRLIALTEQYAVNELVKASRNAQDIDGEVLNYLELAQFHNA
HQLTAWCLHHICTHYNNICANYRREVRSKSLENQEYFEKHRWPPVWYLKEEDHYQRVKKE
REKEDVLLNKHLSRRRWCFWSSSPAVA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggactacgaaagacccaacgtagaaacaataaagtgtgtcgttgtaggagacaatgcc
gtaggaaagactcgccttatttgtgcccgagcctgtaacgccactttgacccaataccag
ctgctggccacacatgtccctacagtctgggctatcgatcagtaccgagtctgtcaagag
gtattagagcgttccagagatgtggtggatgacgtcagcgtgtccctcaggctgtgggac
accttcggagaccaccacaaggacaggcgctttgcctacggcaggtctgatgtggtggtt
ctctgcttttccattgccaaccccaactccctctatcatgtgaagaccatgtggtacctg
gagattaaacacttctgcccacgtactccagttattctggtcggatgtcaacttgaccta
cgttatgcagacttggacgctgtcaaccgggctaggcggccattagcaagacctataaag
ccaggagatattttgcccccagaaagaggacgagaagtagcaaaggaattgggaattcca
tactatgagacaagtgtctttgatcaatttggcattaaagatatctttgacaacgctatc
cgagcagctctcatctccagacgccatcttcagttctggaagtcccatctacgcagggtt
cagaagccccttttgcaagcgccattcctcccaccaaaagcgcctccaccactaatcaag
atcccagactgtcctcgcaacaacccggagggtcccaggaagttgctggaaaaccccttc
tgtgctgatgtcatgttcattgttcaggaacacttcaatgtatttgcccacaagatctac
ctatctacctcatcctccaagttctatgacctcttccagatggacctctctgaagagttc
cagtgcatggttgcgacccagtataacaaacgagaacacctgatgcgaaccctcagcctg
gacacagatgaagccatggctgtgctgcctaacctctcacctagttccctacgggcttcc
aagagtgatgggactcttaaggtaaagaatgttaatgccaagcaccaccacaaccagctg
tctctggcactttggtgcaaggccttccaaagcattcacaaagaaactgtagttatccca
ggaacaggaacagcagctgttatgacggtggtgaaaatggacaactccttccagctgggt
cccttccgtgcagtgctccggttcttgtacacaggagaactgaatgaaagggagatggac
ctgatgaagatcgctcagattgctgagatcctagaagtttttgaccttagaatgatggtg
gagaacatcatgaacaaggaaggctttatgaataaggaaatcacaaaagcgtttcatgtg
agaaaagccaacagaattaaggagtgtcttgccaagagcagcttcacagatgtggtgttt
aggttggatgatggcaccatcaacgcccataagcctttgttaatctccagttgtgattgg
atggctgctctgtttggaggttcattcatagagagcgcaaataatgaggtctcttttcct
aacaccagcagggtgtgtatgcaggcagtgctggagtatctctacaccaatcagctgtca
cccatggctgatttggacccaatggaattaattgctctggcaaacagactgtgccttccc
cgcctcattgccctgacagagcaatatgctgtgaatgagctggtgaaagcctctaggaat
gcccaagacatagatggagaggttctcaactacctagagcttgctcagttccataatgcc
caccaacttactgcttggtgcttgcatcatatatgtactcattataataacatctgtgcc
aattatcgccgagaggtcaggtctaaatcgctagaaaaccaagagtactttgagaagcat
cgctggcctccggtttggtacctgaaggaggaagatcactaccaacgagtgaagaaggag
agggagaaggaagacgtgctcttaaacaagcacctgtctcgtcgtcgctggtgtttctgg
agctcttctcctgcagtggcctga
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