Clarias gariepinus (North African catfish): 128541358
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Entry
128541358 CDS
T10780
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128541358 (tdrd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Motif
Other DBs
NCBI-GeneID:
128541358
NCBI-ProteinID:
XP_053367710
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All DBs
Position
14:complement(16622102..16632225)
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AA seq
1166 aa
AA seq
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MNRAFSPSLVRPTLPLRRPMLNPGLVTPTPVITNQGTCLPQEQSPIPGSLDALKAESGRS
ENERMPLRDNNARAGPISAPVIVNLCNYCSSEGNLRCTRCKKTCYCSVTCQTEDWKAHRH
ICKPNASENNGSDKPKVPSIPGCVDGPSVLESKLNKSPVEPKRAHQQDLRKHNFFKGDEL
HASVVEMRSPGKFFIHMQSLEVSETLKNITLSLQKAYGGSLASAYKPEIGELCAVKFSLD
QNWYRGEIESVDLDHLTAKVLYIDFGNEEDVKLDQICPLSANIDKAPPCALQCCIAGVSP
VTSSWTGECCIALRQLVAGKSLTFTVVDFLCCNAVLAVDAPLSTHGKNLSTFLVDEGYAI
KENSSTKTQLNQDIGFLMTASLENFKRLSIGKNENAEAQPPEPLSQGVGDTFTAIVTHLL
SPSEIICQKLENASSIQQLQMNLREHCNKTQASENFRPAPGTVCCSRFSEDNQWYRAKVL
AYSPEDRVFVGYIDFGNSEEVSLNQLRPISMALLSLAAQAIPCALAGIKPTSDAWSEESV
MTLKKLVCNRFIRIEIVGERHGTALVSMVDESSDPQTDVAELLVATGHAAAGNMETFKEE
TVKSLDKNVCKSSQLIQDGPVGKLVWSSAELPTDGQKVVLVVSVLKNPGQFYCYNYNVEG
MQTLVELSASLTKHCEADGTAFNPVVGEPCCARFKDGSWYRAIVQSLDENGNAKVHFVDY
GNTFEIQTAHLRAIKPGLLKLPFQAICCWLAGCEPLGTEWSTGAVQKFQTLCLGKQLTGR
VLSVSEKGYGVELESNGYDITAVLIAEQFAKPAGQENKPSQAATFSESTEAAPVPAETYL
HTKQPNKPPGQTPATSPSRTPNETASFSLDWKTVELPRGKTFQPQVAAVTSPSLFYVMNP
TEVNVEKLQSVMMEVMRYCSKQTQHNQTMPLPGSACCAQFSGDKNWYRAVVLEVTSTYAS
VIYADYGNMELVPVSSLLPIPKALLQHPFQIARCALSGKEHFPTVWPPELLELFGGQMNG
KVLASVEHFDGTFNLLNITEGSAEGGSYINASVLRALKNTPSKSSTKFPTQEIRAQGPGQ
KQADGTSSDSDHSLSADVGKPKPQSHGKENVKMVVSSMEEEHPQPSNSMVTSNASASCCC
VSLEQKIAHIEELLLLLVKQKDVKQK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtgccttttcaccatcgctggttagaccaacactgcctttgagaagacctatg
ttaaatccaggtttggtgaccccaacccctgttattaccaaccagggcacctgcttacca
caagagcagtctccgatacctggcagcttagatgctctcaaagctgaaagtggcagaagc
gagaatgagaggatgcctttgagagacaacaatgctagagctggacccatctctgctcca
gtaatagtgaacctgtgtaattactgcagtagtgaaggaaatcttcggtgcacacgctgc
aaaaagacttgctattgttctgtgacttgccagacagaggactggaaggcccatcgccac
atttgtaagccaaatgcatcagaaaacaatggaagtgataaaccaaaggtgccctcgatc
cctggttgtgtagatggacctagtgttttagaatctaagctaaacaaaagtcctgttgaa
ccaaagagagctcaccaacaagatttacgcaagcataacttcttcaaaggagatgagttg
catgcatctgtggtggaaatgaggtcccctggaaagttcttcatccacatgcagtcactg
gaggtgtcagagacgctgaagaacatcactctaagtctgcagaaggcctatggtggttca
cttgcatctgcatacaagcctgaaattggtgaactttgtgctgtgaaattttcactggat
cagaattggtatcgaggtgaaattgaatctgttgatttggatcacctcactgccaaagtg
ctttacatagactttggaaatgaagaggatgtgaagttggaccagatatgccccctgtca
gcaaatattgataaggcaccaccatgtgctctacagtgttgtattgcaggagtttctcca
gtcacaagcagttggacaggcgaatgttgtatagcactaagacagcttgttgctggaaag
agcctgactttcactgtagtggatttcctgtgctgtaacgcagtgcttgctgtagatgcc
cctttgtccacacatggcaagaatcttagtacgttcctagttgacgagggttatgcaata
aaagagaactcttccacaaagacgcagctcaatcaagatattggttttttgatgactgcc
tcattggaaaacttcaagcgtttgagtattgggaaaaacgagaatgctgaggctcagcca
ccagagcctttgagtcaaggagtgggcgacacctttacagctatagtcacccatcttctg
tcgccttcggagattatttgccaaaagctagaaaatgccagtagtattcaacagttacaa
atgaatttgagagagcattgtaacaagactcaggccagtgagaacttccgacctgctcct
ggaactgtttgctgttctcgcttctcagaagacaatcagtggtatagggctaaagtgctg
gcctattcccctgaggatcgcgtgtttgttggctacatagactttgggaactctgaggag
gtgtcgttaaatcagttgcgtcccattagtatggctctgttatccttggctgcccaggca
atcccatgtgccctggcaggtattaagcccacttcagatgcatggtcagaggagtcagtg
atgaccttgaaaaaactagtctgtaaccgcttcatccgtattgagattgttggagagcga
catggaacagctttggtctcaatggttgatgagtctagcgatcctcagacagatgtagct
gagcttctggttgctacaggccatgctgctgcaggaaatatggaaacgtttaaagaggaa
acagttaaaagcctggataagaacgtatgtaaaagttctcaacttattcaagatgggcct
gtaggcaagttggtgtggtcttctgcagaacttcctactgatggccagaaggtggtgcta
gtggtcagtgtactgaaaaatcccggacaattttactgctataattacaatgtagaaggc
atgcagaccctggtggagttgtcagcttcactgacaaagcactgtgaggctgatgggact
gcttttaatcctgttgttggagaaccttgttgtgctcgcttcaaagatgggagctggtac
agggccattgttcagagtcttgatgaaaatggaaatgcaaaagtgcattttgtagattat
ggaaacacctttgaaatacagacagcccatctaagagctatcaaacctggcctcctcaaa
cttcctttccaggccatatgttgttggcttgcaggatgtgagcccttagggacggagtgg
agtacgggtgcagtgcagaagtttcagactctgtgtttggggaagcagctcactgggaga
gtgctgtcggtctcggagaagggttacggagtagagttggagtctaatggctacgatatt
actgctgtacttattgccgaacagtttgccaaacctgcaggacaggagaacaagccatca
caggcagctacattcagcgaatcgacagaagcagcaccagtgcctgctgagacttacttg
cacaccaaacagccaaataaaccccctggacaaacacctgccacctcaccctctagaaca
ccaaatgaaactgcttctttttctctggactggaagacagtggaattgcctcgcggcaag
acttttcagcctcaggtggcagcagtgaccagcccaagtctcttctatgtgatgaatccg
acagaggtgaacgtggagaagttgcagagcgtaatgatggaggtgatgaggtattgcagc
aagcagacccagcacaaccagaccatgcctttacctggatcagcctgctgtgctcagttc
tcaggtgacaaaaattggtacagagctgtcgtattggaagttactagcacatatgcaagt
gtaatttatgcagactatggaaacatggagctggttcctgtttccagccttctacctatc
ccaaaagcacttttgcagcatccatttcaaatagctagatgtgctctttcagggaaagaa
cacttcccgactgtttggcctcctgagctcttggagctttttggtggacagatgaatgga
aaagtactggcctcagtagagcattttgacggcacctttaacctgctaaatattactgag
ggctcagctgaaggaggcagttacatcaatgccagtgttttaagagcactgaagaatacc
cctagcaagtctagcacaaaattcccaacccaagagataagggcccagggacctgggcag
aaacaggctgatggcacatcctctgactctgatcatagtttatctgcagatgttgggaag
cccaaacctcaaagtcatggaaaagagaacgtgaagatggtagtttccagcatggaagag
gagcacccacagccctcaaattcaatggttaccagtaacgcttctgcttcatgctgttgt
gtgtcccttgaacagaagattgctcatattgaagaattgctccttctgctggtgaagcaa
aaagatgttaaacaaaagtaa
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