Clarias gariepinus (North African catfish): 128541377
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Entry
128541377 CDS
T10780
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128541377 (trim65)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128541377 (trim65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
U-box
CREPT
LAMB1
DUF5129
TelK_muzzle
Motif
Other DBs
NCBI-GeneID:
128541377
NCBI-ProteinID:
XP_053367738
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All DBs
Position
14:complement(24885991..24891784)
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AA seq
520 aa
AA seq
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MEEHSLTCTICLDCFKYPVTLPCGHTFCKACISKHWDQVERVGPPNTSFNCPICKETFSP
RPTLNRNVALSVLTEVATNSVAERAAGAACGMDRVEDGFEELCARHQKPLIFYCRKDCMC
VCCVCSVKECKDHDKVLMSEERTNREEGLKKKGVEIGKRVEDTERSILALSENIAEAKVS
LQQTSQWASAKFSQLLKVLMEKQELTQSFLEQQQASTVAQAETRLSDLQEKLEQLKELQE
QISNLCGLPDFQLIQNSRLVEVPQVGLVPVEVSVNLQEKLNPVTDVLSRISKLVCEDLDK
AVYAVVSHTKEGSPQDKRPMLAVVPSPATPPYPAGKEGLIQYRCSLSFDPRTANAHLKVS
QNNQRAEHLITGPLAVQADEVRFDHTWQVLCLEKFSHGRHYWELEVSKPWAYVGVTYPDI
PRKEKGKTSMLGMNALSWSLHLNERQLTAWHGSHGEPVMSDLQLNKRPLRIGILLDYEEG
TLAYYGENQVRLHAFHCVFSHELYPACWIGEGVSVTLCPV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacacagtctgacttgcaccatctgcttggactgcttcaaataccctgtgact
ctcccctgtggccacaccttctgcaaagcatgcatatccaaacactgggatcaggtggag
cgagttggacctccgaatacgtcattcaactgcccgatttgcaaagagacgttctctccc
agaccgactttaaatcgcaacgtggccctgtcagttttgaccgaggtggccaccaacagc
gtggcagagagagctgcgggtgcagcctgtggaatggaccgggtcgaagatggcttcgag
gagctctgtgctcgccatcaaaagcctcttatcttctactgcaggaaggattgtatgtgt
gtgtgctgtgtgtgctctgtgaaagagtgtaaagaccatgacaaggtgctgatgtctgaa
gaaaggactaacagagaagagggacttaagaagaaaggcgtggaaatcggaaagcgtgtg
gaagataccgagaggagcattttagcgctctcagaaaacatcgctgaagctaaggtgtcc
ctacagcaaacatctcagtgggcgagcgccaagttctcgcagctgctcaaggtgctgatg
gagaagcaggaattgacgcagagtttcttggagcagcagcaggccagcactgtggctcag
gctgagaccagactcagcgacctgcaggagaaacttgagcagctcaaagagctacaggag
cagatcagcaacctttgtggcctccctgactttcagctcattcagaactccaggctggtg
gaggtccctcaagtgggtttagttcctgtagaagtcagtgtaaaccttcaggagaaacta
aatccagtcactgacgttctgtctcgcatctcaaagttagtctgtgaggatctggataaa
gcggtgtatgcagtcgtgagccataccaaagaaggctctcctcaagacaagagaccaatg
ctcgctgttgtgccaagtccagccaccccgccttatccagcaggaaaagagggccttatt
caataccgttgttcgttgtcctttgacccacgcacagccaacgctcatctgaaggtttct
cagaacaaccagcgagcggagcacctgattaccgggcctcttgcagtgcaagctgacgag
gtgcgctttgaccacacctggcaggtgttgtgccttgagaagttctcacacggtcggcac
tactgggagctggaggtgtccaagccttgggcgtacgtaggtgtgacgtacccagacatc
ccacgtaaggagaaaggcaagacgtccatgctgggaatgaatgccctgtcatggagcctg
cacctaaatgagcgccagctcacggcttggcacggcagccatggagagcctgtaatgtct
gacttacagttaaacaaacggcctctgcgcattggcatactgctggactatgaggaaggt
actctggcttactatggggagaaccaggtgaggctgcacgccttccactgcgtcttttcc
catgagctctatcctgcctgctggattggggagggggtcagcgtcactctctgcccagtg
tga
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