Clarias gariepinus (North African catfish): 128541406
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Entry
128541406 CDS
T10780
Symbol
socs3b
Name
(RefSeq) suppressor of cytokine signaling 3b
KO
K04696
suppressor of cytokine signaling 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
cgar04910
Insulin signaling pathway
cgar04920
Adipocytokine signaling pathway
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128541406 (socs3b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128541406 (socs3b)
04920 Adipocytokine signaling pathway
128541406 (socs3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128541406 (socs3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128541406 (socs3b)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
128541406 (socs3b)
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
DUF7145
SAM_KSR1_N
SH2_2
Motif
Other DBs
NCBI-GeneID:
128541406
NCBI-ProteinID:
XP_053367786
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All DBs
Position
14:17533772..17537465
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AA seq
223 aa
AA seq
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MVTHSRLDGAMSSSPFQGGVRLPAHRYKTFSSRAQYQMVLAAVRKLQESGFYWDAVSGKE
ASTLLSTEPSGTFLVRDSSDNRHFFTLSVKTATGTKNLRIQCDASSFFLQTDPRSLQTVP
RFDCVLKLIHHYMPSAREGGGMSVVASGVDTEGGSSGADGSTYFIYSGGEKIPLELLRPL
ASSMSTLQHLCRKTLNGHIEVSNKRDQLPQSLQEFLEEYDAPI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggtaacccacagcaggctcgacggcgccatgagcagcagccccttccaaggcggagta
cgcctgcctgcccaccgctacaagaccttcagctccagagcacagtatcagatggtgctg
gcggctgtgcgcaagctgcaggagagcggcttctactgggatgctgtaagtgggaaggag
gccagcaccctgctgagcaccgagccatccggcacgttcctggtgcgtgacagctccgac
aaccgtcactttttcacgttaagtgtgaagactgccacaggcaccaagaacctgcgtatc
caatgtgacgccagctcgttctttttgcaaacggacccgcgcagcttgcaaaccgtgcca
cgttttgattgtgtgctgaaactcatacatcattacatgccctctgccagagaaggggga
ggcatgtctgtagtcgcatctggagtggacactgaaggtggcagcagtggggcagatgga
agtacatacttcatttattctggaggagagaaaatccccctggagctgctgcgccctctg
gcctccagcatgtccacactgcagcacctctgccgcaagacacttaatggccatatagaa
gtgtctaataaacgggaccagctgcctcagtcgctccaagagtttcttgaggagtatgat
gcaccaatataa
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