Clarias gariepinus (North African catfish): 128541468
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Entry
128541468 CDS
T10780
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128541468 (zeb1b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128541468 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
Homeodomain
zf-C2H2_6
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
128541468
NCBI-ProteinID:
XP_053367870
LinkDB
All DBs
Position
14:19357302..19420731
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AA seq
1097 aa
AA seq
DB search
MADGPRCKRRKQANPKRTSVSNYSHVLEGQSDSDDEDKLHIVEEDGTPVDGADGDSVAHD
DDTNGPEDRWEEVKEECVSEEDERSRDALVEEMLQQGDTAVIFPEAPEDEPRQGTPETSG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSVCSYTFTHRTQLD
RHMSAHKAGRDQRHVTQTGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCK
KRFSHSGSYSSHISSKKCIGLISVNGRSRPSPTTGGTKTPQCPSPSLPSSPATARTQTRD
KLDHSKPLQEQLPITQIKSEPLDYEYKPVVVAPAAPGGVNGVFQGGAAAPLQGAVQAVVL
PTVGLVSPISINLGDLQNMLKVAVDGNVIRQVLENAQIKGQAAGAGRVAIAQAPQQVIQA
ISLPIVDQDGTAKIIINYSLDPSQAQAALQNLKKEPAGQDINSCKAERLPEDLTVKTKTT
RDETTIAVDGECQQEKAKLYNHTTKKHCGKEEQEVNGTHLEEKSEADVELCPGQPPLKNL
MSLLKAYFALNAEPTKEELAKISESVNLPIDIVRKWFEKMQNGQIPMDVSPATPQKEQNS
GTDVNGILEETQKSVSEQDSKKNQEEEDMELHSPAEGTTAGISGTENGPTSPLPLNLSAD
GPVPAQTAEEGEGPLDLSLPKSVAAANTASVHSVYSAQDEPLNLVCTKKEVLGNASTSTA
IYASQTSANSLNIVTTQLPTLVAITKQGPVQSLRTLTTTKQAILIPQLAYTYTTTASSPA
GGDTPQKAILQVNGVKEEKQEAGSEVASLLEEQTDSDSGPVRKKMKKTENGLYACDLCDK
IFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKEAHGQNQAQRDEEEENPNEDQPGAASSAASPPSQVDSDERGSS
AREDEESEEEDAMGSGSMVDEDEIQVVRIGEEGGEDEEDGGEQEFPEEEPGNEEAVRENG
GHEQEGTGESQEEGEEDGEMMKVVVMQDDEDEEETENAEPMYMQENIGEEEAEEEGENVK
EESGNEGNTPSENGDVK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaagaggacgagcgtg
agtaactacagccatgtactggaaggccagtcagactccgatgatgaggacaagctccat
atcgtggaggaggacggaacccccgtggacggcgctgatggtgacagtgttgcccatgac
gacgacaccaacggcccagaggacagatgggaagaagtgaaagaggagtgtgtgtcagag
gaggatgagaggagtagagacgctctcgttgaggaaatgcttcagcaaggagacacagcc
gtcatcttcccagaagcaccagaagatgaaccacgccagggaacaccggagaccagcggc
catgatgagaatggcacaccagacgcgttctcgcagctcctcacctgtccctactgctcc
cgcggctacaagcgctacacgtctctgaaggagcacataaagtacaggcacgagaagagc
gaggacaacttcagctgctcggtttgcagctacacttttactcaccgcacgcagctcgac
cgacacatgagcgcacacaaagcaggcagagaccagcggcatgtaacccaaacagggggt
ggaggaaaccgaaagtttaagtgcactgaatgtggcaaagccttcaagtataaacaccac
ctgaaagaacacctgcgtatccacagtggagagaagccatacgagtgcccaaactgtaaa
aagcgtttttctcactccggctcctacagttcccatatcagcagcaagaaatgcatcggc
ctcatttctgtcaacggccgatcccgaccctcgccaaccacaggaggcaccaaaacccct
cagtgtccatcaccatcgctgccatcttcccctgccactgcccggacacagacccgggac
aaactggaccatagtaaacccctgcaggagcagctgccaatcacacagattaaatctgag
ccattggactatgagtacaagcctgtagttgttgccccggctgcccctggaggagtaaac
ggggtttttcaaggaggggcagcagcacccttacagggggcagtgcaggctgtggtgctc
cccactgtaggactggtatccccaatcagcattaatctaggagacttgcaaaacatgcta
aaggtggcagtcgatggaaatgtgatcaggcaggtgttggagaatgcccagattaaaggc
caggctgcaggcgctggcagagtggctattgcacaggctccgcagcaagtcatccaagcc
atcagtcttcccattgttgaccaggatggtactgccaagatcataatcaactacagcctt
gacccatcgcaagctcaggcagctctgcagaacttaaagaaagagccggctggtcaggat
ataaactcctgcaaggctgaacgactgccggaggatctgacagttaaaaccaagacaacg
agggacgagaccaccatcgctgtggatggagagtgtcagcaggagaaggccaaactctac
aatcacacaacaaagaaacactgtggcaaggaggaacaggaagttaatggaacacacttg
gaagagaagtctgaagcagatgttgaactgtgtcctgggcagcccccactgaagaacctc
atgtccttgcttaaggcatactttgccttaaatgcagaacccaccaaggaagagctggca
aaaatatcagagtcagtcaatcttcctatcgatattgtcaggaagtggtttgagaaaatg
cagaatgggcagattccaatggacgtctccccagcaacaccccagaaagagcagaatagc
gggacagacgttaatggcattctggaggaaacccaaaagtcagtatctgagcaggacagc
aaaaagaaccaagaggaggaggacatggaacttcatagcccagcagagggcactacagct
gggataagtggaactgaaaatggccccacatcccctttaccactaaatctatctgcagat
gggcctgtgccagcccagactgcagaggaaggagagggacctcttgatttgtctctcccc
aaatctgtagcggcagcaaatacagccagcgttcactctgtttactcagctcaggacgag
cctctgaacttggtttgcacaaagaaggaagtgctcggcaatgcaagcaccagcactgcc
atctatgccagccaaacaagtgccaattccctgaacattgtgaccactcaattgcccacc
ctggtggctatcaccaagcaaggccccgtgcagagcttacgtaccctcactaccactaaa
caggccatcttaatcccacagctagcctacacctacaccactaccgcctccagcccagca
gggggcgacacaccacagaaggccatactgcaggttaatggtgtcaaggaggagaagcag
gaggctggttcagaggtggcttccttgctggaggagcagacagactcagactccgggccg
gtgaggaagaagatgaagaagaccgaaaatggcttgtacgcctgtgacctgtgtgacaaa
atcttccagaagagcagctcgctgcttcggcataaatatgaacacacaggtaaacgtcct
cacgaatgcgggatctgcagcaaagctttcaaacacaagcaccacctgatcgagcacctg
cgtctgcactcgggagaaaagccgtatcagtgtgacaagtgcggcaagcgcttctctcac
tccggttcctactcgcagcacatgaaccatcgctattcctactgtaagaaggaggcacac
ggccagaaccaggcgcaaagagacgaggaggaggagaatcccaacgaagatcagcctgga
gcagcaagctccgccgcctcgccgccgtctcaggtggactcagacgaacgagggagcagc
gccagggaggatgaggagagtgaggaggaagacgccatgggctcggggagcatggtggac
gaggacgaaattcaggtggtgaggatcggcgaggaaggaggagaggatgaggaagacggc
ggcgagcaggagtttcccgaggaggaaccgggaaatgaggaggcggttagggagaacggc
ggacatgagcaggagggtacaggggaaagtcaagaagagggagaggaagatggagaaatg
atgaaggtcgtggtgatgcaagatgatgaagatgaagaggagacggaaaacgccgaaccg
atgtacatgcaggagaacataggagaggaggaagcagaggaggaaggagaaaatgtgaag
gaggagagcggaaatgaaggaaacacacccagtgaaaacggagatgtgaaatga
DBGET
integrated database retrieval system
