Clarias gariepinus (North African catfish): 128541504
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Entry
128541504 CDS
T10780
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128541504 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128541504 (gspt1)
03012 Translation factors [BR:
cgar03012
]
128541504 (gspt1)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128541504 (gspt1)
Translation factors [BR:
cgar03012
]
Eukaryotic type
Release factors
128541504 (gspt1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128541504
NCBI-ProteinID:
XP_053367939
LinkDB
All DBs
Position
14
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AA seq
564 aa
AA seq
DB search
MDQRDTAPESWEEDDVEARADTELQAAFTGLNVNAPEFVPSFVPRVSPQNTGSNGPDAVT
NMEISEPVAAVENGETDTGTAESWEEKGDSDEVEARGGAMEESGPEREEAQDEMMMEEDE
EMLTPKLPPPLPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESSDMCPWYTGLPFIPHLDSLPNFN
RSSDGPIRLPIVDKYRDMGTVVLGKLESGTIGKAQQLIMMPNRHTVEVLSLLSDDVETDD
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagagacactgcgccggagagctgggaggaggacgacgtggaggcccgggcc
gacaccgagctccaggctgccttcaccggcctcaacgtcaacgcaccagagtttgtaccg
tcattcgtacccagggtgtctcctcaaaacaccggctccaacggtcctgacgctgttacg
aacatggagatttcagaacctgtagctgctgtggaaaacggagaaacagataccggcaca
gcagagtcgtgggaggagaagggtgactcggatgaggtggaggcaagaggcggggctatg
gaggagagcggacctgagagggaagaagcccaagatgagatgatgatggaagaggatgag
gaaatgctcacccctaagctgcctcctcctctccccgacgccccaaagaaagagcatgtt
aatgttgtgtttataggacatgtggatgctggcaagtcgacaattggtggacaaatcatg
tatttgaccggcatggtggacaaaaggaccctggagaaatacgaaagggaagcaaaagaa
aagaacagggagacatggtatctctcttgggctttagacacaaaccaggaagagcgagac
aaggggaaaacagtagaagtaggaagagcatattttgaaacggagaagaagcactttacc
atcctggatgccccgggccataaaagctttgtgcccaacatgatcggtggagcatcacaa
gccgacttggcagtgctggttatttctgccagaaagggtgagtttgagacgggctttgaa
aagggcggtcagacccgcgagcatgctatgctggccaaaacagctggagtcaaacacctg
atagtccttatcaacaaaatggacgatcctacagtaaactggagcttggatagatatgag
gaatgtaaagagaaactagtgccatttttaaagaaggtgggctttaatccaaagaaagac
atccacttcatgccctgctctggactgacaggagccaacttgaaggaatcttctgacatg
tgtccttggtacacggggttaccatttattccacatctggacagcttgccaaacttcaat
cgatcaagtgatggtcccatcagattgcccattgtagataagtacagggacatgggcact
gtggtgcttggcaaactggaatcagggactatcggcaaagcacaacagcttatcatgatg
ccaaacaggcacactgtggaggtgctgagcctactgtccgatgacgtagagacagatgac
gcagggccaggtgagaacctgaagctacgtctcaaaggcatcgaagaagaggagatcctc
cctggcttcattttatgcaatgcagagaacctgtgccactcaggacgcacgtttgatgcc
cagattgtcattattgaacacaaatccattatatgtccaggttacaatgcagtccttcac
attcatacctgcatagaggaagtgcagataacagccttaatctgtctggtggacaagaag
accggagagaagagcaagacacgtccccgctttgtcaaacaagaccaagtgtgcatcgcc
cgtcttagaacggcaggaacgatctgcttagaaacgttcaaagacttcccacagatgggt
cgtttcactttgagggatgagggtaaaacaattgccattggcaaggtgttgaagttggtg
ccagagaaggactga
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