Clarias gariepinus (North African catfish): 128541540
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Entry
128541540 CDS
T10780
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Pattern recognition receptors [BR:
cgar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128541540
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GFIT
Other DBs
NCBI-GeneID:
128541540
NCBI-ProteinID:
XP_053367984
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Position
14:complement(27444180..27458647)
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AA seq
1095 aa
AA seq
DB search
MFTGVNSMMTLPYASHLDETMETELLKTASGAISCVSFKSDWSIEKPPSLSRENVIPKSR
CNMKSASPATSCVSMKSDHSKEMPLSLSGEDVITEEIQPFKTEALQEPTLIKISSGFWKD
SKNVLSRVLNTHKTSMSNKHQSLFEGIKMYRNKTPLNTIYTQLYIIEGESESVNNEHEVL
KMERRPGRQHFHDRPINCLDIFNYNGELDRENGARGQKLRTVLTKGIAGIGKTVSVQKFI
LDWAEGKANQDIDFMFVLPFRELNLIKDDCYSLHKLLCDFHPELKVLDARIYQMCKVVFI
FDGLDESRLPLNFLNSKKVSDVMMTSSVSALMSSLITGHLLPSALIWITSRPAAASQIPR
MYLDRVTEIQGFSDEQKEEYFRKKISEQDHAEKIISHIKRTRSLYIMCHIPVFCWILATV
LQKIMKQNIHTEAPKTLAEIYAHFLLIQTNIKNEKYEKMDERDPEKLLQTNRGTILKLAE
LAFKQLMKGNVMFYEEDLRECGIDTTEALVYSGICTEIFKEESVLYQKKVYCFVHLSFQE
FFAALYVFYCYITKSMEALQFFMPLSGQWSEDLPLDELLYSAIDKVLHTDNGHLDLFLRF
LLGISLETNQSLLRGLLSHTHSSSENIKSAVQYIKWQIQTEDLPSDRAINLFLCLTEMKD
QSLLKEIQEFLKSENRSEKKLSAAHCTAMAYILQMSDDVMEELDVKNYNASQEGRWRLIS
AVSNCRKALLAGCYLTVSSCDTFTSTLQLEKSPLRELDLSNNDLQDSGVKLLSDGLKSPH
CKLEILRLAISNLGAKACEYLGSAFMLPHSTLRELDVSNNDLGDTGVKLLSDGLKSSDCK
LERLRLSGCLITGEGCAALASALRSNPAHLRELDLSYNLPGDTGEEMLSAILNDPDCKLE
TLRLDHANKIRLTPGLRKYACRLTLDPNTAHTRLALSDGNRKVTHGKDDQPYPDHPERFD
YWKQVMCRESLHGRCYWEAEWAGGESVISMSYKEIRRKGGRGDCVFGSSEHSWKLDCSSN
SYTAWHNKKRTDIPAPPSCSNRVGVYLDWLEGSLSFYSVSSDAHTLTHLHTYNATFTEPL
YAGFWVDCDSSVSLF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaggggtgaattccatgatgacgcttccgtatgccagtcatctagatgaaacc
atggagacagagttgttaaaaacagcatctggagcaattagctgtgtctcctttaagagt
gattggtccatagaaaagccgcctagcctgagcagggaaaatgtcatccctaagagcaga
tgtaatatgaaaagtgcatctccagcaaccagctgtgtgtctatgaagagtgaccactcc
aaagaaatgcccttaagcctgagcggggaagatgtcattactgaagaaattcaacccttc
aaaacggaagctctgcaagaacctacactgataaagatatcttcaggcttttggaaagat
tctaaaaatgttctatccagagtcttaaatactcacaaaaccagcatgagcaataagcac
cagagcttattcgaaggaatcaaaatgtacagaaataaaactcctctgaatacgatttat
actcagctctacatcatagagggagagagtgaaagcgtgaacaacgaacatgaagtttta
aagatggagagaaggccaggacgacagcacttccatgataggccaattaactgcttagat
atatttaattacaatggagaacttgacagagaaaatggagcaagaggacaaaagctcaga
acagtgttaacgaaaggaattgctggaatcgggaaaaccgtgtcggtacagaaattcatt
ctggattgggcagaaggaaaagccaatcaggacatcgatttcatgtttgtgcttccgttc
cgtgagttaaatttgattaaagatgactgttacagtcttcacaagctcttgtgcgacttc
catcccgagctaaaagttctggacgcacgcatataccagatgtgtaaagtcgtctttatt
ttcgacggcctagatgaaagcagacttcctctcaactttttaaatagtaagaaagtatct
gatgtaatgatgacatcatcagtgagtgccctgatgtcaagcctaatcaccggtcacctg
cttccttctgccctcatctggataacctccagaccagcggcggccagtcagatcccccgg
atgtacctcgatcgcgtgacagaaattcagggatttagcgacgaacaaaaggaagagtat
tttaggaagaaaatcagcgagcaagaccacgccgagaaaatcatttcccacattaaaagg
acgaggagtctttatattatgtgccacatcccagtgttttgttggatattagctacagtg
ctacagaaaataatgaaacaaaatattcacacagaggcgccgaaaactctggctgagata
tatgcgcacttcctgcttattcaaacgaacataaaaaatgaaaagtatgaaaaaatggat
gaaagagatcccgagaagcttctgcaaacaaacagaggcacgattttaaagctagcagaa
ctggcttttaagcagctgatgaagggcaacgtgatgttttatgaagaagacctgagagag
tgcggtatcgataccaccgaggcattggtgtactctgggatttgcactgagatcttcaaa
gaagaatctgtgctgtaccagaagaaggtctactgctttgtgcatcttagctttcaggag
ttttttgctgctctatacgtgttttactgctacataacaaagagcatggaggcgctacag
tttttcatgcccctctccggacagtggtccgaggatcttcccttggacgagttgttatat
tcagcaatcgataaagtcttacatactgacaacggacacttagatctttttctccgtttc
ctgcttggcatctcactggagaccaaccagagcctcctgcgaggcctcctgagccacaca
cacagcagctcagagaacatcaagagtgcagtccagtacatcaaatggcagattcaaacc
gaggaccttccgagtgacagagcaatcaacctgttcctgtgtctcacagaaatgaaggat
cagtctctgttaaaagagattcaggagttcctgaagtcggagaatcgatccgagaaaaag
ctctcggctgcacactgcacagcgatggcgtacatactgcagatgtccgacgacgtcatg
gaggagctggatgtgaagaattacaacgcatcacaggagggaagatggaggctgataagt
gctgtaagcaactgcagaaaggctctgctagcaggctgttatctcactgtaagttcttgt
gacaccttcacctcaactctgcagttagaaaagtcccctttgagagaactggacctcagc
aacaacgatttgcaggactcgggggtgaagctgctctctgatggcctgaagagcccacac
tgtaaactggagatactcagactagctattagtaatcttggagcgaaggcatgcgagtat
ttgggatcagctttcatgctgccacactcaaccctgagagaactggacgtcagtaacaat
gatttgggggacacgggagtgaagctgctgtcggatggcctgaagagctcagactgtaaa
ctggagagactcagattatctggatgtctaatcacaggagaaggctgcgctgctctggct
tcagcactgaggtcaaaccccgcacacctgagagagctggatctgagctacaaccttcca
ggagacacaggagaggagatgctgtccgctatactgaacgatccagactgcaaactggag
acactcaggttggaccatgcgaacaagattagactcacacctggtctaagaaaatatgcc
tgtaggctcacgctggacccgaacacggcacacacacgtctcgctctgtctgatgggaac
aggaaggtgacgcacggtaaagatgaccagccgtaccctgaccacccggagaggttcgat
tactggaagcaggtgatgtgtagagagagtctgcatggacgctgttactgggaggcggag
tgggccggcggggaatccgtgatctcaatgagttataaagaaatacgccggaaaggaggc
agaggtgactgcgtgttcggctccagtgagcattcctggaaactggactgctctagtaac
agttacactgcctggcacaacaagaaaagaacggacatacctgcacctccgtcctgctcg
aatcgggtaggagtgtacctggactggctcgagggttccctgtcgttctacagcgtctcc
tctgacgcacacacacttacacacctgcacacatacaacgccacgttcacagagccgctt
tacgcagggttttgggttgactgtgactcctcggtgagtctgttctga
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