Clarias gariepinus (North African catfish): 128541631
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Entry
128541631 CDS
T10780
Symbol
rab40b
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128541631 (rab40b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cgar04031
]
128541631 (rab40b)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
128541631 (rab40b)
GTP-binding proteins [BR:
cgar04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
128541631 (rab40b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128541631
NCBI-ProteinID:
XP_053368118
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All DBs
Position
14:complement(18265249..18274560)
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AA seq
289 aa
AA seq
DB search
MLSHGSEFSVKMSHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGATESPYGYNMGI
DCKTTTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWI
KEIDEHAPGVPKILVGNRLHLAYKRQVTTENAQAFAERLGVTFFEVSPLCNFNITESFTE
LARIVLMRHGMERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMAN
GLNARMMHGRSYSVIASSGAKRNGTKKSKLIYPPLSPSQSCTRTTCKIS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccatgggagtgagttctcggtgaagatgagccacaggagcagtccagctaaa
gcgtacgacttcttgttaaaattcctgctagtgggagacagtgatgtgggcaagggcgag
attctggccagtctgcaggacggggctacagaatccccttatggatataacatggggatt
gactgcaaaacaactaccatactgcttgatgggcgtagaatcaaattgcagctttgggac
acctctggacagggacgtttctgcaccattttccgttcatactccagaggagcacagggt
gttattctcgtatatgacattacaaatcggtggtcctttgatggaattgacagatggatt
aaagaaattgatgagcatgcaccaggagtccctaagatcctggtggggaaccgtctgcac
ttggcctacaaacgtcaggtgacaactgaaaatgcccaagcctttgctgagcggctgggt
gtcacctttttcgaagtcagccctctttgtaacttcaacatcactgagtccttcacggag
ttggctcgcatagtgctaatgcgccatggcatggagagactctggagacctaacaaagtg
ttgagcctgcaggatctgtgctgccgctccattgtctcctgcacccccgtgcacctggtg
gacaaactcccactacctgttgccttaaagagccacctgaagtccttctccatggccaat
ggcctcaacgcccgcatgatgcacggacgctcatactccgtcatagccagcagcggagcg
aagaggaatggaacgaagaaatccaaactcatctaccctcccctgagcccgtcacagagc
tgtacgaggaccacatgcaagatatcgtag
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integrated database retrieval system
