Clarias gariepinus (North African catfish): 128541766
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Entry
128541766 CDS
T10780
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128541766 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cgar03051
]
128541766 (psmc5)
Proteasome [BR:
cgar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
128541766 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
RuvB_N
PRS7_OB
TIP49
AAA_3
AAA_18
AAA_28
AAA_17
Mg_chelatase
NPHP3_N
AAA_33
AAA_14
Parvo_NS1
ATPase
FapA
IstB_IS21
PhoH
AAA_24
AAA_7
DUF815
AAA_25
Sigma54_activat
bpMoxR
ABC_tran
DUF5906
RNA_helicase
AAA_11
Zeta_toxin
AAA_19
TsaE
DivIC
APG6_N
HR1
Motif
Other DBs
NCBI-GeneID:
128541766
NCBI-ProteinID:
XP_053368310
LinkDB
All DBs
Position
14:3047323..3052081
Genome browser
AA seq
406 aa
AA seq
DB search
MALDGVDHMELEDSKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgctagacggagttgaccatatggagttggaagacagtaaaggaggctcaggtctc
cggcagtattacctgtccaaaatcgaggagttacagctcactgtgaacgagaaaagccag
aaccttcggcgtctgcaggcccagcggaacgagctcaatgctaaagtgcgtctgcttcgt
gaggagctgcagctgctgcaggaacagggctcatacgtgggtgaggtggtccgagccatg
gacaagaagaaggtgctggtgaaggttcaccctgagggcaaattcgtagtggatgtggac
aagaacattgacattaatgacgtgaccccgaactgccgggtagcgctgcgtaacgacagc
tacacactgcacaagatccttcccaacaaggtggaccctctggtgtcactcatgatggtg
gaaaaggtccctgactccacctatgagatgatcggtggtctggacaagcagattaaagag
atcaaggaggtgattgagcttcccgtgaagcacccggaactcttcgaggccctcgggatc
gcacagccgaagggggtgctgctgtacggacctcccggcaccgggaagacgctgctggcc
cgagctgtcgctcaccacaccgactgcaccttcattcgtgtctccggctccgagctagtg
cagaagttcatcggagagggagcaagaatggtgcgcgagttgttcgtgatggcacgcgag
cacgcaccctccatcatcttcatggacgagatcgactccatcggctcatcgcgtctcgag
ggaggctccggcggagacagtgaggtgcagcgcaccatgctcgagctcctcaaccagctc
gacggctttgaggccaccaagaacatcaaggtcatcatggccaccaaccgcatcgacatc
ctcgactcggctctgctccggcccggccgcatcgaccgcaagattgagttcccccctccc
aatgaagaggcccgtctggacatcctaaagatccactcgcgcaaaatgaacctgacgcgt
ggcatcaacctgcgcaaaatcgccgagctcatgcccggggcgtcaggtgctgaggttaag
ggtgtttgtacagaagctggcatgtacgctctgcgagagaggagggtccacgtgactcaa
gaagattttgagatggctgttgcaaaggtgatgcagaaggacagcgagaagaacatgtct
atcaagaagctctggaagtag
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