Clarias gariepinus (North African catfish): 128542531
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Entry
128542531 CDS
T10780
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128542531 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128542531 (rubcn)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Other autophagy associated proteins
Others
128542531 (rubcn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
128542531
NCBI-ProteinID:
XP_053368393
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Position
15:complement(20066853..20082159)
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AA seq
882 aa
AA seq
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MEGCSEADSVDMRREHWKLLSNLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMSNILSHGL
KHEQVYYKQKDYWRFVWCLRSISPNLAPHVEQFSQMEPVLSSSVQCESDKAERWLLHSLQ
SHTLSVQLKPLITHHNTTRKYYTDEAFLLSELHVAAMFQCLEAVEQNDARLLALINTARL
CHLKGFVSLDLLTTQHCVLPGVSIRPHASSCLSFRDTQTSYTERSTAVSVSALGAPWACL
STDQSISDPMLTQNSQTDSTHLVNSASSEAGDCDGDDGPEYLAIGNLGRRNRRGSSIAPQ
ITEHAPTKGLAPEAPPHSQRRSSFSEMERGKRRSRGHTRSLSDTGVMQKHKQESAVDGKC
VTGFGPFSSHSSDSSHSSLYMESGGLQYSSVSDGLFRKPSEGQSLISYLSEQDFGSCADL
EKENAHFSISESLIAAIELMKCKMRAEEAEEDGDSDSEIQQLKQKIRLRRQQIRRSRLQT
PSSTHPTHPSTDSSGSLQSSMNSLLHSDSGSADELENTLLRDADVKQSTTLSGRSFISSE
SVSHWLLQSNSAESVAMGLLRQFEGLQLPAASELEWLVPEQDAPQKLLPMPDSLPISPDD
GEHADVYKLRIRVRGNLEWAPPRPQIIFNIHHAPKRKVLVAKQNYRCAGCGTRIDPDYIK
RLRYCEYLGRYFCQCCHDNAVAVVPGRVLCKWDFGKYYVSNFARDLLGKIAQDPLFNLHA
INSGLYKKVKNLEAVRVLRLQLFHMKNLFKTCRIAKELNILQHFDSVPAHLTEDLHLFSL
NDLMAVRSGDLAPRLRDLVRVGSEHVASCVLCQANGFVCEFCGNDKDIIFPFELNKCRRC
EECSACYHRSCFKNKSVCPRCLRLAERRERMNSSNSAEDEGQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggagggctgctcagaggcggacagtgtggacatgaggcgtgagcactggaaactcctg
tccaacctgaagacgaccgtcgaaggacttctatctacgaataacccgaatgtttggtct
cgctatggaggactgcagcgacttcacaaagacatgagcaacatcctgagtcatggcctt
aaacatgaacaggtgtactataaacagaaggattactggcgctttgtgtggtgtctgcgg
tccatcagccccaacctcgctcctcatgtagaacagttcagtcagatggagccggtgtta
agcagcagtgttcagtgtgagagtgataaagccgagcgttggctcctccacagtctgcag
agtcacacgctctctgtacagctaaagcccttaatcacacaccacaacaccacccgcaag
tactatacagatgaagcatttctcttgagtgagctgcatgtagcggccatgtttcagtgt
ttagaggcggtggagcagaatgacgcacggctgcttgcccttatcaacactgctcgcctg
tgtcacttgaaggggtttgtttctttggatctgctcaccactcagcattgtgtgctgcct
ggagtttccatacgtccacacgcatcatcctgcttgtcatttagagacactcagacttcg
tacactgagaggagtacagcagtgtctgtgagtgccttgggggctccatgggcatgtttg
agtacagaccaaagcatctcggacccaatgttgactcagaattctcagactgactctacc
catctcgttaactctgcttcatctgaggccggagactgtgatggtgatgacggtccagag
tatcttgccatcgggaacctggggaggcgaaaccgtagaggttctagcatcgcgccacaa
atcaccgagcacgctccaaccaaagggcttgcccccgaagctccgccccattcccaaaga
cgcagcagtttttccgagatggaaaggggaaagagacggagcaggggtcacacaaggtca
ctgtctgacacaggggtcatgcagaaacataaacaagagtctgctgtagatgggaagtgt
gtgactggattcgggcccttctcttctcacagcagcgacagcagtcacagttctctatac
atggaatcgggaggtcttcagtatagtagtgtgtctgatggattgttccggaaaccgtca
gagggtcaaagtcttatcagctacctgtcagagcaggactttggcagctgtgcagatctg
gagaaggaaaatgcacacttcagcatctcagagtctctaattgcagccatcgagttgatg
aaatgtaagatgagagcagaggaggcagaggaggacggagacagcgactctgagattcag
cagctcaaacagaagatccgtttgcgcagacagcagatccgtcgcagccgcctacagaca
cccagctctacacaccccactcatccctccacagacagtagtggatcattgcagagctcc
atgaattccctgcttcactctgactctggatcagctgatgagttggaaaacactttgttg
agagatgcagatgttaaacagagcacaactttgagtggcaggtccttcatcagctctgag
tctgtatctcactggttgttgcagtcgaacagtgctgagtctgttgcaatggggctgctg
cgtcagtttgagggtctacagcttcctgctgcctctgaacttgagtggcttgtccctgaa
caggatgctcctcagaagctgctgccgatgcctgactcattgccgatctctccggacgac
ggtgaacacgctgatgtgtataaactcagaatccgagtgaggggaaatctagagtgggcg
cccccgagacctcagataatcttcaacatccatcatgcacccaagaggaaggtgttggtg
gcgaaacagaattacaggtgtgcaggatgtggaactcgtattgacccagattacattaaa
aggctgcgttactgcgagtacctaggccggtatttctgtcagtgttgccatgacaacgca
gtggccgtagtgcccggacgcgtcctgtgtaaatgggattttggtaaatattatgtcagt
aacttcgcccgagacctgctgggaaaaattgctcaggatcctttgtttaacctccacgcc
atcaacagcggcttgtacaagaaagtgaagaacctggaggccgtccgggtattgaggctg
cagctcttccacatgaagaatctctttaaaacctgccgaatagccaaagagctcaacatt
ctacaacactttgattcggttcctgcgcacctaactgaggatctccacctgttctctcta
aatgacctgatggccgtacgctcaggtgacctcgcacccagactgcgtgaccttgtgcgg
gtggggtcagagcatgttgcttcttgtgtgctttgtcaggcaaatggatttgtttgtgag
ttttgtgggaatgataaagatatcatcttcccctttgagctgaacaagtgtcgtcgttgt
gaggaatgtagcgcatgttatcaccgctcgtgctttaagaacaagagtgtgtgtccgcgg
tgtctccgcttggccgagagacgggagagaatgaacagctcaaattcagcggaggacgag
gggcaataa
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