Clarias gariepinus (North African catfish): 128542534
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Entry
128542534 CDS
T10780
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128542534 (rtel1)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128542534 (rtel1)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128542534 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
128542534
NCBI-ProteinID:
XP_053368397
LinkDB
All DBs
Position
15:8430421..8448447
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AA seq
1177 aa
AA seq
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MPSLTLRGVNVDFPFTPYPCQTDYMSKVIECLQNKVNGVLESPTGTGKTLCLLCAALGWR
AYFKDSISARKIAERLGGAELFPDRPMSSWGTTATDGETPAYYTDIPKIIYASRTHSQLT
QVISELKNTTYRPKICVLGSREQLCINQDVLKQESNHVKVHLCRAKVSTRSCVFYNNVDE
KSTDKDIINSILDVEDLVKAGKKQRVCPYYLSRSLKQHADLIFMPYNYLLDPKSRRAHNI
ELKGAVVIFDEAHNVEKMCEESTSFDLTPYDLTSAIDAVDKLLREQASDIGKGESSEEFS
GESLSSGLNLDITTIAKIKQVLMDLEITINDFEMPSNNQGITKPGSFIYELFKKAHVNYD
TKTAIVEAMEQITGYLAGKPGIFLNTSGLQKVADIIQLVFAVEPAEGGVPSHKGNTMQQF
KVHIHPDTSNFKKKQTTDLWASSNTKKQGNVLSYWCFSPGFSMQDLLRQEVRCIILTSGT
LSPLSSFTCEMQIPFPVCLENPHVIQKDQIFVSIVDKGPDGVQLSTAFDRRFLPENMASL
GNTIVNLCRVVPHGLLVFFPSYPVLDKTLEYWRGSGHVDRMESMKPMFVEPKGKGTFTEV
MDGFYNKVNDSKSNGGSFFAVCRGKVSEGLDFADTYGRGVIITGLPYPPRMDPKVVLKMQ
YLDEMCRNKTSGVKYLSGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDYRFKSTDVR
QQLPSWVRPYVRTHDNFGTVVRDAAQFFRVAQKLRPVPEKKIKGAGSESGTAKGSCQTSP
GCSRPAMSAWECSSHLKAKVLDSHVPSLKKRKFEEHSERDGTARLCVQYEVEMSSSKKRP
MSLLDALEKSDPSQDDDTFVGEEKASRLSTLSLQHDKRMDDESRGGKRKIRVVQDRKPIV
SSAADKGKSFMLELKKNLSQESFTQIMYALQMYKTTDNLNDLMAKAADLLIQDPNTHILL
RGIYQFVRPHHKKQFDEKCQHLTGKGCGYKPEHSLSREERQLLMKQTAKVETPVTCTTSQ
LDSSKQLNQGGSHLGTHNLCGTDSSVKDQKPQQSGKDSQFSSSLLSDIKKSIGAEKTNQL
FAALQMYKKTNDYEQMVSTVVGLLTERDEDIILLKRLAVFIPPHHRQQFSEMLTGLTGSV
PEACQDSDEVSDQSSPPVSVSQLCAGKSQSKISSFFN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttactttgagaggagttaatgtggatttcccgttcactccgtatccatgc
cagacagattacatgagcaaagtgatcgagtgtctgcaaaacaaagtaaatggagtgctc
gagagtccaactggaacggggaaaaccctctgcctgctttgcgccgcgcttggctggagg
gcgtatttcaaagactccatatccgcccgtaagattgcagagaggttgggaggagccgag
ctttttcccgacaggcccatgtcatcttggggaacaacggcgactgacggtgaaacacca
gcgtattacaccgacattcccaagatcatctacgcatcgaggacacattcacagttgacc
caggtgatcagcgaactcaaaaacacaacctacaggccgaagatttgtgttctgggctcc
agggagcagctgtgtatcaaccaggatgtactgaagcaagaaagcaatcatgtcaaggtt
catttatgcagagcaaaagtttcaacccgctcctgtgtcttctacaataacgtcgatgaa
aagagtactgacaaagacatcatcaattccatccttgatgtggaagatcttgtaaaagct
ggaaaaaagcaaagggtgtgtccatattatctgtctcgctcactaaagcagcacgctgac
ctcatcttcatgccctacaactacctcctcgatccaaagagtcgtcgcgcacacaacata
gagcttaaaggagcagtggtcatttttgatgaagcacataacgtggagaagatgtgtgaa
gagtccacctcgtttgacctgactccttacgatctgacgtcagccatcgatgcagtggac
aagcttttgcgagagcaggcctcggatatcggcaagggagaatcttcagaggaattcagc
ggcgaatctttgagctcaggtctgaacctggacatcactacgatcgcaaaaataaagcaa
gttttaatggacctggagattaccattaatgactttgagatgccgtccaataaccagggg
attaccaagcctggcagctttatttatgagcttttcaaaaaggcccacgtcaactacgac
accaaaacagcaatcgtggaggcgatggagcagatcacaggatatttggcaggaaagcct
ggcattttcctcaacaccagcggactacagaaagtggcagatataatacagttggtgttt
gctgttgaaccagcagagggcggtgtgccgtcacacaaggggaacaccatgcagcagttt
aaggtacacattcatccagacactagcaatttcaaaaagaagcagacaacagatctgtgg
gcgtcgtctaatacaaagaaacaagggaacgtgctgagttactggtgcttctctccggga
ttcagcatgcaagacctcctgcgacaggaagtgcgctgtatcatcctgactagcggcacc
ctgtcccccctgtcatctttcacctgcgagatgcagatcccatttcccgtgtgtctggag
aaccctcacgtcattcagaaggaccagatcttcgttagcattgtggacaaagggccggac
ggcgtgcagctcagcacagccttcgacaggaggtttcttcctgagaacatggcgtcatta
ggaaacactattgttaatttatgccgagtggttcctcatggcctgctggtgtttttccca
tcatacccggtgttggataagactctggagtattggaggggtagtgggcacgtagaccga
atggagtcaatgaaacccatgtttgtggaacccaaaggaaaaggtacctttacagaggtg
atggatggattttataacaaggtcaatgactccaagtcgaacggagggagcttctttgct
gtgtgtagaggaaaggtgagtgaagggttggactttgcggacacgtatggccgtggagtg
atcatcactggtcttccctaccctccgagaatggaccccaaggtggtgctgaagatgcag
tatttggatgagatgtgcagaaacaaaaccagtggcgtgaagtatctgtctgggcaggag
tggtacaggcagcaggcctcccgcgcagtgaaccaagccataggtagagtgatccgccat
cgtgaggactacggagccatctttctttgtgactacaggttcaaaagtacggatgtacga
cagcagctcccatcttgggtcagaccttatgttcgaactcatgacaattttggcaccgtg
gttcgggatgctgcacagtttttccgagtcgcacaaaaacttaggcctgtaccagagaag
aagataaaaggtgcgggaagtgagagcgggacagctaaaggcagttgccaaacaagtcca
gggtgcagtcgtccagccatgagtgcctgggagtgcagttcccatctcaaagccaaagtg
ctcgactctcacgtgccaagtttaaaaaaaaggaaatttgaagagcactcggagagagat
gggacggccaggctttgtgttcagtatgaggtggagatgagttccagtaagaagagacct
atgagcctgctggatgcactggagaaaagcgatcctagtcaggatgatgatacctttgtt
ggggaggagaaggccagtcgtttgtccacattatctctacagcatgataagcgcatggat
gatgagtctagaggagggaaacgcaaaatccgagtagtgcaagaccggaaacccatagtc
tccagtgcagcagacaagggcaagagctttatgcttgagctgaagaaaaatttaagtcag
gagagcttcacacagatcatgtatgcgcttcagatgtacaagactacagataacctcaat
gaccttatggcaaaagcagcagaccttctcatacaagaccccaacacacacatcctgctt
agaggaatctaccagtttgttcggccacaccacaagaagcagtttgatgagaagtgtcaa
caccttacaggcaaaggctgtggttacaaacctgagcactcgctctctagggaggagaga
cagttactcatgaaacaaacagccaaagtggagactcctgtaacgtgcacaacctcccaa
ctagactcaagcaagcagctcaatcaaggtggatctcatttgggaacgcataatttgtgt
ggaacagattcaagtgtaaaggatcagaagccacagcaatcagggaaagatagtcagttc
agttcttccctgctgtctgatataaaaaagtctattggtgctgagaagaccaatcagctt
tttgcagcattgcagatgtacaaaaaaactaacgactacgaacagatggtatcaacagtt
gtggggttgctgactgagcgtgacgaggacattatacttctaaaacggttagcagtcttc
atcccacctcatcatcgtcagcaattctctgagatgttaacaggcctgactgggagtgtc
ccagaggcttgccaggattcggatgaggtttcggaccagtctagtcccccagtttcagtt
tcacagctctgtgcaggaaaatcacaaagcaagatatcttcctttttcaactga
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